Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9782g00002 ATGGATGGAGAATTGCGTAGAAGGGCAGGACCCCACAAGAGGGTGACACGCAAGAATTCTCTCTATCTTCTAATCCACCATTTCTCCAATTGGAAGCACACGCCAACGATCCTATTGCTCTATTATTCAACATTCAATGTTCATTGCCATACCCCACCACCACCACAACCCTTCTTCTGCCTTGCTTCTCCTATTATCTATTCCTTGAGACCCAAAATGGCCTCTGCCACCACTCTCTTCTCCTCTAACCCCATGTTTTCCACTGACCACCACTGTCTCTCTCCCTCTCCAACCATTCCCAAGTCCTTCACTGGACTTTGCAAGCCCTTCCATTCAAGGGTTCCCACTTCCTTCCCCTTCTTCCATTGCAGAAGACCAAGATTCTTTGTTAGGGCCACTGTTATTAAGTGGAGATGTCCAAAGCAAATCCTCCCTCCCAATTGTGATACCGGTTTCCAAAAGAAAGTCCTGTATCTGGAATCCATCGGTATTGACTCTTTCTCACTTGTTGAAAACCATCCAACGCTGATCACCACTCCTCTTGCTGACATAAAATCCACCGTGGAATACATTACTGCCATGGATTTCACTGCAATTGAGTTTCGGCGAATGGTTGGCATGTGCCCCGAGATTCTGACCACCCAAGTCTCAGACATAATACCTGTCTTCACCTTTCTTCACCGCGAGGTTCATGTGCCTGGCTCGGATATTAAGCGGGTCATAAATCGTCGGCCCAGGTTGCTTGTCTGCAGTGTTAGTGAGCGGCTTCGTCCTACCCTATACTTCCTCCAAAGTATTGGCATAGAAGAGGTAAACAAGCACACTGATTTGCTATCATGTAGTGTTGAGGAAAAGTTCATGCCCAGGATTGATTACTTTGAGAATATCGGGTTTTCCCGCCGCGATGCAACTTCAATGTTTCAAAGATTTCCTCAGCTGTTTTGTTATAGTATTAAAAATAATTTGGAGCCTAAATACAGTTACTTTGTGGTGGAGATGGGGAGAGATTTAAAGGAGCTGAAAGAATTTCCACAGTATTTCTCATTTAGCCTAGAGAATAGAATTAAGCCTAGGCATAAAAAGTGTTTAGAAATGGGGGTGTGTTTTCCTCTCCCTGCCTTGTTAAAATCAGGTGAAGCGAGATTTCAAAAAAGATTAGACGTATGTGTAAATTCTTCAACACCCTTGAAAACATCCCCTCTGTGGTTTGCTGGCTGTGATCTTTATGAACAAGGTATTTCCACATTTGAAGTTACTAGACAAACCTCCAGGAATTAA 1278 0.4397 MDGELRRRAGPHKRVTRKNSLYLLIHHFSNWKHTPTILLLYYSTFNVHCHTPPPPQPFFCLASPIIYSLRPKMASATTLFSSNPMFSTDHHCLSPSPTIPKSFTGLCKPFHSRVPTSFPFFHCRRPRFFVRATVIKWRCPKQILPPNCDTGFQKKVLYLESIGIDSFSLVENHPTLITTPLADIKSTVEYITAMDFTAIEFRRMVGMCPEILTTQVSDIIPVFTFLHREVHVPGSDIKRVINRRPRLLVCSVSERLRPTLYFLQSIGIEEVNKHTDLLSCSVEEKFMPRIDYFENIGFSRRDATSMFQRFPQLFCYSIKNNLEPKYSYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHKKCLEMGVCFPLPALLKSGEARFQKRLDVCVNSSTPLKTSPLWFAGCDLYEQGISTFEVTRQTSRN 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9782g00002 425 FunFam Transcription termination factor MTEF1, chloroplastic 226 390 - -
Mupr9782g00002 425 Gene3D Transcription termination factor 3, mitochondrial 214 390 IPR038538 -
Mupr9782g00002 425 PANTHER CGI-12 PROTEIN-RELATED 168 387 IPR003690 GO:0003690|GO:0006355
Mupr9782g00002 425 SMART mt_12 167 197 IPR003690 GO:0003690|GO:0006355
Mupr9782g00002 425 SMART mt_12 304 336 IPR003690 GO:0003690|GO:0006355
Mupr9782g00002 425 SMART mt_12 202 233 IPR003690 GO:0003690|GO:0006355
Mupr9782g00002 425 SMART mt_12 270 299 IPR003690 GO:0003690|GO:0006355
Mupr9782g00002 425 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Mupr9782g00002 425 SMART mt_12 238 269 IPR003690 GO:0003690|GO:0006355
Mupr9782g00002 425 Pfam mTERF 138 237 IPR003690 GO:0003690|GO:0006355
Mupr9782g00002 425 Pfam mTERF 231 383 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mupr9782g00002 mTERF 2.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9782g00002 K15031 - gmx:100804440 635.18