Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9776g00003 ATGGGAAGGCCTCCTTGTTGTGACAAATCCAATGTGAAAAGGGGTCTTTGGACTCCTGAGGAAGATGCTAAAATACTTGCCTATGTATCAAATCATGGAACTGGAAATTGGACATTGGTTCCAAAGAAAGCAGGACTGAACAGGTGCGGTAAAAGTTGCAGGCTAAGATGGACCAACTACCTAAGACCTGACCTTAAGCATGATAGTTTTACTCCTCAAGAAGAAGAGCTCATTATTAACCTTCATGGAGCCATAGGAAGCAGGTGGTCTTTAATTGCAAAACGCTTACCTGGGAGAACAGACAATGATGTCAAGAACTACTGGAACACAAAGCTAAGGAAGAAGCTTATGAAGATGGGAATTGATCCAGTGACCCACAAGCCAGTATCACAAGTCCTCTCTGACTTGGGAAGCATCACTGGCCTCCCAAACATCACTAACCAAGTAGGTTTTGTGAACAAGGACTTGATGAGCAACATGCTACCAACCAAAACTGAACCATCAGGTTCCAATAAGTCAATGTTGGAGCACACACAAGAGGGTCAAGTTCCTTACCAAGTCATCAACTCAGAAAATGTCCAACCACAACATGTCTTCAGTGAAGCTGCTTCCTCAACCTCATCCTCATCTTCCTCCAACCTCACACAGTTAGGCTCACCACAGTCCTACTTTTGCCAAACCCCTCAGGCTCAAGTCACCCCTCCTTGTTCCTCCTTTGATTGGAGTGAGTTTCTTCACAGTGACTCATTTGTGTGGTCATTGAACCCCTCAGGTCTAATGCAAAGTGAAGTTGAACTTTCTAACAATGCCAAAAGCAATGGAGGAGCTGCAAGTGAGGGTTCTGAGGCTGTTGCTTGTGGTGCAAGCATGGAATATCATATCAACAAGCAGTGTGAAGGTCATTCAACTTCAGGGTGTTCATTTGTGGATGGTATTTTGGACAGGGATAGTGAGATAAGAGCAGCATTCCCTGAACTTTTGGATGCTTCTTTTGACTACTAA 1002 0.4421 MGRPPCCDKSNVKRGLWTPEEDAKILAYVSNHGTGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLKHDSFTPQEEELIINLHGAIGSRWSLIAKRLPGRTDNDVKNYWNTKLRKKLMKMGIDPVTHKPVSQVLSDLGSITGLPNITNQVGFVNKDLMSNMLPTKTEPSGSNKSMLEHTQEGQVPYQVINSENVQPQHVFSEAASSTSSSSSSNLTQLGSPQSYFCQTPQAQVTPPCSSFDWSEFLHSDSFVWSLNPSGLMQSEVELSNNAKSNGGAASEGSEAVACGASMEYHINKQCEGHSTSGCSFVDGILDRDSEIRAAFPELLDASFDY 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9776g00003 333 FunFam transcription factor MYB80 69 129 - -
Mupr9776g00003 333 CDD SANT 69 112 IPR001005 -
Mupr9776g00003 333 Gene3D - 68 131 - -
Mupr9776g00003 333 PANTHER F14D16.11-RELATED 1 333 - -
Mupr9776g00003 333 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr9776g00003 333 Gene3D - 7 67 - -
Mupr9776g00003 333 FunFam Transcription factor RAX3 7 67 - -
Mupr9776g00003 333 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr9776g00003 333 CDD SANT 17 61 IPR001005 -
Mupr9776g00003 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mupr9776g00003 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mupr9776g00003 333 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr9776g00003 333 SMART sant 66 114 IPR001005 -
Mupr9776g00003 333 SMART sant 13 63 IPR001005 -
Mupr9776g00003 333 Pfam Myb-like DNA-binding domain 69 110 IPR001005 -
Mupr9776g00003 333 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9776g00003 Mupr-Chr9776 16225 17904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9776g00003 1 333 MYB Transcription Factor Family AT3G28470 50.000 4.42e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr9776g00003 Myb_DNA-binding 7.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9776g00003 K09422 - gmx:100815077 554.673