Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9753g00007 CTGCTCATGTGCAATGCATATGAAGCCCAGCCCAGGCGAAGTTTGGGCCATACTGAGGTCTCTGGTCGAATTGGCGGGAGCGGCAGTGTCTCCGCTAAACATTGGCTTCGAACTTTGGGACCTTACGGTTCTCTTCCTCCTCTCGTCACCATGGAGACCATGCCCTCCGTTCTCAAGAAATTCTTTGGGTTTTCGGATTTTCGGCCTTATCAGAGAGAAGTTATTGAGAAAATTATTGAGAAAAGGGATTGTTTGGTACCTCCCTTGGTTGTTAAAAAGACTGGGATAGTTGTAAGTCCTCTGATATCCTTGATGCAAGACCAGGTGATGGCTTTGAAACAACGGGGCATTAAAGCTGAATATCTTGGAAGTGCCCAGAAGGATTCCACTGTGCACTCTAAAGCTGAACGAGGTCAATTTGACATTCTGTTCATGACTCCTGAGAAGGCATGCACAATTCCTAGCAGTTTCTGGTCCAACTTACTAAAGACTGGAATTAGTCTTTTTGCTGTTGATGAAGCCCATTGCATATCAGAATGGGGACATGATTTTAGGGTGGAGTACAAGCTTTTAGACAAGTTACGTGGGGATTTGCCAGATGTTCCTTTTGTTGGTCTAACTGCAACTGCTACTGAAAAGGTTCGATTTGACATCATCAGTTCCCTGAAGATGAATAATCCTTATGTTATGGTTGGTTCATTTGATCGAACAAATCTTTTCTATGGTGTCAAACTATTTAACCGAGGACAATCTTTTATTGATGAGCTTGTGCGAGAAATTTCAAAAGAAGTCGCTAGTGGTGGTTCAACTATAATTTACTGCACAACAATCAAAGATGTTGAGCAGATATCCAAGTCATTTGCAGAAGCAGGCATTGAGGCAGGAATGTACCATGGGCAAATGAATGGAGAAGCTCGAGAGGAGTCTCATAGATTATTTGTTAGAGATGAACTGCAAATCATGGTAGCCACCATCGCCTTTGGGATGGGCATAGATAAACCTAACATAAGACAAGTGATTCACTATGGTTGCCCTAAGAGTCTAGAGTCCTACTACCAGGAAAGTGGACGATGTGGTAGAGATGGTATAGCTTCTGTTTGTTGGCTTTACTACACAAGAAGCGACTTTGCTAAGGGCAACTTTTATTATGGAGATTTAAAATCAGAAAAACAAAGAAAAGCTGTTATGGAGTCATTGCTGGCTGCTGAACGCTATTGTGTGCTGACAACTTGCAGAAGAAAGTTCTTGCTTGAATACTTTGGGGAAAATTTTTCAGCTGATAGATGTGGAAACTGTGATAATTGCAAAGTCCCAAAGAAGGAGCGTGATATGTCCAGAGAAGCATTTCTTCTAATGGCTTGCATTCATTCATGCAGGGGCAGATGGGGCCTTAGTATGCCCATTGATGTACTGCGCGGGTCTCGA 1425 0.4281 LLMCNAYEAQPRRSLGHTEVSGRIGGSGSVSAKHWLRTLGPYGSLPPLVTMETMPSVLKKFFGFSDFRPYQREVIEKIIEKRDCLVPPLVVKKTGIVVSPLISLMQDQVMALKQRGIKAEYLGSAQKDSTVHSKAERGQFDILFMTPEKACTIPSSFWSNLLKTGISLFAVDEAHCISEWGHDFRVEYKLLDKLRGDLPDVPFVGLTATATEKVRFDIISSLKMNNPYVMVGSFDRTNLFYGVKLFNRGQSFIDELVREISKEVASGGSTIIYCTTIKDVEQISKSFAEAGIEAGMYHGQMNGEAREESHRLFVRDELQIMVATIAFGMGIDKPNIRQVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKGNFYYGDLKSEKQRKAVMESLLAAERYCVLTTCRRKFLLEYFGENFSADRCGNCDNCKVPKKERDMSREAFLLMACIHSCRGRWGLSMPIDVLRGSR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9753g00007 475 SUPERFAMILY "Winged helix" DNA-binding domain 434 474 IPR036390 -
Mupr9753g00007 475 CDD DEXHc_RecQ 56 235 - -
Mupr9753g00007 475 FunFam ATP-dependent DNA helicase 236 437 - -
Mupr9753g00007 475 Pfam DEAD/DEAH box helicase 77 214 IPR011545 GO:0003676|GO:0005524
Mupr9753g00007 475 Pfam RecQ zinc-binding 386 436 IPR032284 -
Mupr9753g00007 475 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 84 228 IPR014001 -
Mupr9753g00007 475 NCBIfam RecQ family ATP-dependent DNA helicase 56 474 IPR004589 GO:0004386|GO:0006310
Mupr9753g00007 475 Gene3D - 48 234 IPR027417 -
Mupr9753g00007 475 SMART helicmild6 281 362 IPR001650 -
Mupr9753g00007 475 Gene3D - 235 371 IPR027417 -
Mupr9753g00007 475 Pfam Helicase conserved C-terminal domain 255 361 IPR001650 -
Mupr9753g00007 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 376 IPR027417 -
Mupr9753g00007 475 Gene3D - 378 475 IPR036388 -
Mupr9753g00007 475 SMART ultradead3 63 246 IPR014001 -
Mupr9753g00007 475 PANTHER DNA HELICASE RECQ FAMILY MEMBER 52 448 - -
Mupr9753g00007 475 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 252 406 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9753g00007 Mupr-Chr9753 23225 28295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9753g00007 268 362 Eukaryotic Initiation Factors Gene Family AT5G11170 28.421 3.59e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9753g00007 K03654 - gmx:100797777 791.956