Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9743g00002 ATGAAACTGAAAACAAGGCAAAAAACATCCAACCACAAAAACACTTGCTTAGTACAAGTCCAGAGAGAGAAAGAGAGAGAGAGAGAGAGAAGTGCTTGTGCTGCAGACAAGATGGAAATCATGGAAGAGAGAAAATTTTCTAAATTGTTGTCAGAGCTGATAGTTTTGGCGGATGAGGTTGCTTCTCTTGCTAAGAACTCTGAAATTGAGGTTGATATTTTTTCTGAGTTTGCCATGTTGGTTGAGAAATTCCCACCAATCTTCAATGACCTGAGGGACAAAAACACAGTATTGGACAAGCCACCTATAAGAAAATCCTTGGAGTCTCTTGAGAATGAGCTGAGGCGTGCGAAAGCTTTGACAAAAAGCTCCAATTTGAGACAACCAATCAAGCAAATTGAGGACATAACACATGATATTGGTCGATCCTTGGGGCTTCTGCTTGTAGGCAGCCTTGAAGTGTCTGTGGATTTTAGAGAAAAGATTGGTACATTGCAAAGACAATTGATGAATGTGAGATTTGATGGCAGTTTAAGTCTAGCTTCAAGTCCAAAATCATTTACCGGCAGTGACATGAAGCTGACTGGAGAAATAGAAGAGGAAATAGTTAATGTTTCTATCGATGATGTTGTTTTGCAACTTAAGAATGGTAATGATGAAGAATTTGCAGTTGCACTTTTGAGACTAAAGGAGTTCATGAGGAGTGAAAGACTGGATGGTGGCTTGATTAATGAGGAAGCAACTCTTGCCATTCTTTTCAATCGTCTAGGTTCGTGTAAGGCAGACAGTAGGTTGGCGATCATCCGATTGCTAAGAAGTATTGCTTTTGGAAATGATAAGAAAAAGGAGAAGATGGTGGATATTGAGTTTTTATCAGCAGTGGTGAAATCACTGACAAGAGATTCAGAAGAGAGGAAGGAAGCAGTGGGGCTGTTGCTAGACCTCTCTGACATTCAGGCAGTTCGACGGCGAATTGGAAGAATTCAAGGGTGCATTGTTATGTTAGTCGCAATCCTTAATGGGGATGACCCTGATGCTTCACATGATGCAGCAAAGTTATTGGATATGTTGTCTAGTAATACTCAAAATGCACTTCATATGGCCGAGGCTGGCTACTTTAAGCCACTGGTGAAATATTTGAAAGAAGGGTCTGACATGAACAAGATCCTAATGGCGACAGCACTTTCAAGGTTGGAGCTGACTGATCACAGCAAACTTTCCCTTGGAGAAGATGGGGCAATTGAGCCCCTTGTGAATATGTTTAGTACTGGAAAACTGGAGTCCAAGCTATCAGCTCTAAATGCGCTACAAAATCTGTCTAGCTTGACAGAAAATGTGCAACGTTTGATCAGATCCGGAATTGCAGGATCACTGCTGCAACTTCTTTTTTCGGTGACATCTGTGCTCATGACTTTGCGAGAGCCTGCATCAGCTATTCTTGCTAGAATCGCTGATTCCGAATCTGTCCTTGTTAACGAAGATGTGGCTCAACAGATGCTTTCACTATTGAATCTTTCCAGTCCTATAATTCAAGGTCATCTATTAGAAGCTCTAAATAACATAGCAGCCAATCCTGGTGCATCCAAAGTGAGAAGCAAAATGAAGGAAAAAGGTGCACTTCAGCTGCTCTTACCCTTTCTGAAGGAAAACAACACTAAAATCAGGAGTAAGGTTTTGAATTTGCTGTACACTCTCTCTAAAGATCTGACAGATGAGTTGACTGAACATCTTGATGAAACTCATCTCATCAACATTGTTACTATAGTCTCAACATCAACATCAGAGAGCGAAAAGGCTGCAGCTGTTGGCATACTGAGTAATCTTCCTGCTAGTAATAAAAAAGTGACAGATATACTGAAGAGAGCAAATTTGCTCCCCATTTTGATATCCATTATGTATTCTAGCACAGGAAGTAATTCATCCACAACAAGTAGCTTCTTAGAAGAGAGCACTGCAAGTGTTATAATTCGCTTCACTAATTCCTCTGACAAGAAACTACAACTTCTTTCAGCCGAACACAGGGTGATTCCTTTGCTTGTAAAACTGCTCTCAAGTGGTTCACCAATCACAAAATCGAGGGCCGCAATCTCTCTGGCTCAACTATCACAGAATTCTCTGTCCCTTAGGAAGTCTAGAAAGTCAAGGTGGCTGTGTGTTCCACCCTCGGTGAATGCATACTGTGAAGTTCATGATGGATATTGCTTTGTCAACAGCACATTCTGTTTGGTCAAGGCAGGTGCTGTTTCTCCCCTTATCCAATTATTGGAAGATACTGAGAGAGAAGTAGTTGAATCTGCTTTGTATGCTCTCTCAACTCTTCTGCAAGATGAAATCTGGGAAGGTGGTGTCAATTCCATTGCCAAGTTGTCAGGTGTGCAGGCTATTGTAAAGAGTCTACAAGTTGGGGATGCAAAGGTTCAAGAAAAAGCAATATGGATGTTGGAAAGAATATTCAAAATTGCTGAATATAGAGTAAAATATGGAGAATCTGCTCAGGTGGTTCTTATTGATCTTGCCCAGAAGAGTGATTCCAGATTGAAGTCAACCGTTGCAAAAGTATTAGCTGAGCTGGAGCTCTTGCAATCTCAATCAAGTTATTTTTGA 2604 0.4094 MKLKTRQKTSNHKNTCLVQVQREKERERERSACAADKMEIMEERKFSKLLSELIVLADEVASLAKNSEIEVDIFSEFAMLVEKFPPIFNDLRDKNTVLDKPPIRKSLESLENELRRAKALTKSSNLRQPIKQIEDITHDIGRSLGLLLVGSLEVSVDFREKIGTLQRQLMNVRFDGSLSLASSPKSFTGSDMKLTGEIEEEIVNVSIDDVVLQLKNGNDEEFAVALLRLKEFMRSERLDGGLINEEATLAILFNRLGSCKADSRLAIIRLLRSIAFGNDKKKEKMVDIEFLSAVVKSLTRDSEERKEAVGLLLDLSDIQAVRRRIGRIQGCIVMLVAILNGDDPDASHDAAKLLDMLSSNTQNALHMAEAGYFKPLVKYLKEGSDMNKILMATALSRLELTDHSKLSLGEDGAIEPLVNMFSTGKLESKLSALNALQNLSSLTENVQRLIRSGIAGSLLQLLFSVTSVLMTLREPASAILARIADSESVLVNEDVAQQMLSLLNLSSPIIQGHLLEALNNIAANPGASKVRSKMKEKGALQLLLPFLKENNTKIRSKVLNLLYTLSKDLTDELTEHLDETHLINIVTIVSTSTSESEKAAAVGILSNLPASNKKVTDILKRANLLPILISIMYSSTGSNSSTTSSFLEESTASVIIRFTNSSDKKLQLLSAEHRVIPLLVKLLSSGSPITKSRAAISLAQLSQNSLSLRKSRKSRWLCVPPSVNAYCEVHDGYCFVNSTFCLVKAGAVSPLIQLLEDTEREVVESALYALSTLLQDEIWEGGVNSIAKLSGVQAIVKSLQVGDAKVQEKAIWMLERIFKIAEYRVKYGESAQVVLIDLAQKSDSRLKSTVAKVLAELELLQSQSSYF 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9743g00002 867 Pfam Armadillo/beta-catenin-like repeat 741 773 IPR000225 GO:0005515
Mupr9743g00002 867 Coils Coil 107 127 - -
Mupr9743g00002 867 SUPERFAMILY ARM repeat 207 462 IPR016024 -
Mupr9743g00002 867 SMART arm_5 527 567 IPR000225 GO:0005515
Mupr9743g00002 867 SMART arm_5 779 819 IPR000225 GO:0005515
Mupr9743g00002 867 SMART arm_5 663 703 IPR000225 GO:0005515
Mupr9743g00002 867 SMART arm_5 278 317 IPR000225 GO:0005515
Mupr9743g00002 867 SMART arm_5 360 400 IPR000225 GO:0005515
Mupr9743g00002 867 SMART arm_5 401 441 IPR000225 GO:0005515
Mupr9743g00002 867 SMART arm_5 735 775 IPR000225 GO:0005515
Mupr9743g00002 867 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 412 454 IPR000225 GO:0005515
Mupr9743g00002 867 Gene3D - 733 865 IPR011989 -
Mupr9743g00002 867 Gene3D - 369 714 IPR011989 -
Mupr9743g00002 867 SUPERFAMILY ARM repeat 394 819 IPR016024 -
Mupr9743g00002 867 Gene3D - 242 368 IPR011989 -
Mupr9743g00002 867 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 746 773 IPR000225 GO:0005515
Mupr9743g00002 867 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 212 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9743g00002 Mupr-Chr9743 2531 6590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9743g00002 217 867 U-box Gene Family AT1G76390 29.353 8.48e-49 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9743g00002 K08332 - gmx:100791453 1342.41