Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9713g00001 ATGGTTGTGATATCAATTTGTTATAACGTTGCTTCATTTGCTTCATTCTCTCAGCAGTATCCAAGAGCATCAGAGGAGCATGTTCCTCTATCATCTCACCAGGGTGCTGCTTCTTCTTTCTCTGGGCGGCTCTTGGTTGATACTAATCTAGATACTTCATCTCCTGATACTTATAGACCTCCTCCTGCTCCTATCCCTTTCAATGTTACGTTAGGTGCCACTCAAACTCCACCTGCGACTCAAGAAATTCGTAGTGACAAGAATAATACATCCTTGCATTCTACAAATTCTAATACAATTCAAGAACCAGTTGCTGGAGACAATCATGGGACCTCAGCTAAGTTGGAAGAGCTGAAGGAATCAGAGTGCAAAGTTCAGACTGATCTAGAGCTAGATTCTGCAAAGGGTTCCGAAATTGAACTTGCAAAGTCGGGAAAACCTATAAATTTAGTAGAAGAGGAGGATACATGCCCAATTTGTTTAGAAGAGTATGATGCAGAGAATCCAAAACTCGCAACAAAATGTGACCATCATTTTCACCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGAAACTTGCCCTGTGTGCGATCAGGATTTGGTTTTCAACCCTCCCATTGAATAA 627 0.4147 MVVISICYNVASFASFSQQYPRASEEHVPLSSHQGAASSFSGRLLVDTNLDTSSPDTYRPPPAPIPFNVTLGATQTPPATQEIRSDKNNTSLHSTNSNTIQEPVAGDNHGTSAKLEELKESECKVQTDLELDSAKGSEIELAKSGKPINLVEEEDTCPICLEEYDAENPKLATKCDHHFHLACILEWMERSETCPVCDQDLVFNPPIE 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9713g00001 208 ProSiteProfiles Zinc finger RING-type profile. 157 198 IPR001841 -
Mupr9713g00001 208 MobiDBLite consensus disorder prediction 69 106 - -
Mupr9713g00001 208 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 33 204 - -
Mupr9713g00001 208 SUPERFAMILY RING/U-box 151 204 - -
Mupr9713g00001 208 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 203 IPR013083 -
Mupr9713g00001 208 MobiDBLite consensus disorder prediction 47 109 - -
Mupr9713g00001 208 SMART ring_2 157 197 IPR001841 -
Mupr9713g00001 208 FunFam Putative E3 ubiquitin-protein ligase RHB1A 134 202 - -
Mupr9713g00001 208 Pfam Ring finger domain 155 197 IPR001841 -
Mupr9713g00001 208 CDD RING-H2_AIRP1-like 153 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9713g00001 Mupr-Chr9713 9653 10518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9713g00001 20 204 C3H Transcription Factor Family AT5G41350 53.191 7.72e-60 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9713g00001 - - gmx:100816369 375.17