Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9709g00011 GTCCATTCCCGGCCCAAAATCTTGGCGAAGCAGGGTAAAACCCTAGTTCTTCTCTTGCGCACGTTCCAAGTTTTGAAGCTCTCAACAGAGGCAACAAGGCAACGTTCGTTCCTTCGTTCGCTCGCACGAAGAGACTACAACAACATGAAGTTCAACATTGCAAATCCAACCACTGGCTGCCAGAAGAAGCTCGAGATCGATGACGATCTGAAGCTACGAGCATTTTGGGACAAGAGGATCTCACAGGAGGTCAGCGGAGATGCTCTGGGTGAGGAGTTTAAAGGATATGTCTTCAAAATCACTGGTGGATGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTTCTAACACCTGGTCGAGTTCGTCTTTTGCTCCACAGAGGAACTCCTTGCTTCCGTGGATATGGAAGGCGCAATGGAGAGCGTAGGAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGATCTCTCTGTTCTGAACTTGGTAATTGTGAAGAAGGGTGAAAGTGATTTACCAGGGCTGACTGATGTCGAAAAGCCAAGAATGAGAGGTCCAAAGAGAGCATCCAAAATTCGCAAGCTGTTCAACCTGTCCAAGGAAGATGATGTGAGGAAGTATGTCAATACGTACCGTCGAACCTTCACAACAAAAGCTGGGAAAAAGGTGAGCAAAGCTCCAAAGATTCAACGACTGGTCACTCCATTGACACTGCAAAGAAAGAGGGCAAGGATTGCTGACAAGAAGAAGAGAATCGCAAAGGCAAAATCAGAGGCAGCTGAGTATCAGAAACTTCTTGCCTCCAGATTGAAGGCGCAGAGGGAGCGCCGCAGTGAGAGTTTGGCCAAGAGGAGATCCAAGCTTTCCAGTGTTTCTAAGCAAGCTGCCACTGCATAG 894 0.4832 VHSRPKILAKQGKTLVLLLRTFQVLKLSTEATRQRSFLRSLARRDYNNMKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKAQRERRSESLAKRRSKLSSVSKQAATA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9709g00011 297 Coils Coil 237 264 - -
Mupr9709g00011 297 Pfam Ribosomal protein S6e 49 176 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mupr9709g00011 297 SMART Ribosomal_S6e_2 49 176 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mupr9709g00011 297 MobiDBLite consensus disorder prediction 268 297 - -
Mupr9709g00011 297 ProSitePatterns Ribosomal protein S6e signature. 100 111 IPR018282 GO:0003735|GO:0005840|GO:0006412
Mupr9709g00011 297 Gene3D - 181 282 - -
Mupr9709g00011 297 MobiDBLite consensus disorder prediction 268 285 - -
Mupr9709g00011 297 PANTHER 40S RIBOSOMAL PROTEIN S6 49 288 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9709g00011 Mupr-Chr9709 38758 41868 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9709g00011 49 297 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 70.683 1.16e-117 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9709g00011 K02991 - gmx:100800507 440.654