Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9695g00004 ATGCCTGCCCAGAAGCGCTCCTTGGCCGAGGCTGTGGACGAAGGGGACACTTCGCAGCAGCACCTCTTCCATTCCCGACATGCGAAGCAACAACAACAGGACCAGCCGCAGGAACACGACGAGGAGCACCACGACGACGAGGACGAGGAGGAGCAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGAGAAGAAGAAGCAGGGCAACATGATAACAACGACAAGGAAAAACCGCAGGATTCCGACGAAACCCCATCTTCTGGCTCTGAAGAAAAACCTGAATTTGTGTTTGTGGAACTACTGGAAATTCGTAAAGATGTCCAATGTCCAATTTGCCTTGGTATTATTAAGAAGACAAGAACTGTTATGGAATGCTTGCACCGTTTCTGCAGGGAATGCATTGACAAATCGATGCGACTAGGGAACAATGAATGCCCTGCTTGCCGCACACATTGTGCTAGTCGTCGTTCCTTGAGAGATGATCCAAACTATGATGCACTTATTGCTGCCTTATATCCAGATATTGAGAAGTATGAACAAGAGGAGCTTGAATTTCGTGAAGAGGAGAAGAACCGCAATAAGCTGATTCAAGCTTCAATAGCAAAAGTAGTTCAACGACAATCTGAAGCACTGGTTAAGAGACGTAAAGATACACCAGGTGCATTTGTAACAAGATCGCAGCGTAATCAGCGAAACATTCATTCTAGGAGACAAACCCTAGCAATTGAAGGATCTGAAGATAATGAGGAGGAAAATGACAATAATGAAAAGGACTCATCTTCAGCTGATGAACGAAGTACAGAACACCGGCAGAGAAGGCGAAAGAGATGGGCTAGAGTTCGCCCCTCTCAACCCTCATCATCCATGGCAAGTCCTGATGGTGGAGGCGTAGAAAGTGATATGGATATAAGTAGAGAAAATCGAGGAATTTCAAGGCAGGTGTCGAAACCTAGAAAGCTTACTTGGGGAAGGGGTGGTTTTAGAAGTCATACTCGGCATGGTAGTGGCAGTGGTAGCAACAGCAAAAGTTCTCGCAGTAGTCGATTGTCTAAGCTGGTTGATCATTTCCGAAGTTTGGATGAAAACACTGATGAGTTAGATGTCCATCTCATGCTTGTTTCTCTCGACCAACAAAGTACACCAAGTTTGCAGCAGTCACACCTTTGCTGTCGACCAACATTGTCTGTCAAGCACCTTTACGAGTATGTTGCTCGTCAGACGTCTTTGCCAGCTGAAGGAGTTGAGATACTGGCAGTCAAAGGATGCCGCAGTACTAATAGTGAAAAGTCAGCTGATGAGAATCCATCCCTGGTATATGATGAGCTAAGAACCCTGGTTATAGATCCACACAAAGATGAACTGGAAATTTTGCAAGCACATGAGACTCTGGCAGGGCTTAGATCCAAATGCATAACCAAGATGGGGCATTTGATTCTTGCATACAGGCAGAAGGAGGCATCATAG 1497 0.4596 MPAQKRSLAEAVDEGDTSQQHLFHSRHAKQQQQDQPQEHDEEHHDDEDEEEQEEEEEEGEEEEEEEEEEEEEEGEEEAGQHDNNDKEKPQDSDETPSSGSEEKPEFVFVELLEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIEKYEQEELEFREEEKNRNKLIQASIAKVVQRQSEALVKRRKDTPGAFVTRSQRNQRNIHSRRQTLAIEGSEDNEEENDNNEKDSSSADERSTEHRQRRRKRWARVRPSQPSSSMASPDGGGVESDMDISRENRGISRQVSKPRKLTWGRGGFRSHTRHGSGSGSNSKSSRSSRLSKLVDHFRSLDENTDELDVHLMLVSLDQQSTPSLQQSHLCCRPTLSVKHLYEYVARQTSLPAEGVEILAVKGCRSTNSEKSADENPSLVYDELRTLVIDPHKDELEILQAHETLAGLRSKCITKMGHLILAYRQKEAS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9695g00004 498 Coils Coil 43 84 - -
Mupr9695g00004 498 MobiDBLite consensus disorder prediction 220 358 - -
Mupr9695g00004 498 SMART ring_2 120 159 IPR001841 -
Mupr9695g00004 498 Pfam Zinc finger, C3HC4 type (RING finger) 119 159 - -
Mupr9695g00004 498 ProSiteProfiles Zinc finger RING-type profile. 120 160 IPR001841 -
Mupr9695g00004 498 MobiDBLite consensus disorder prediction 9 40 - -
Mupr9695g00004 498 CDD RING-HC_RING1-like 117 182 - -
Mupr9695g00004 498 ProSitePatterns Zinc finger RING-type signature. 136 145 IPR017907 -
Mupr9695g00004 498 MobiDBLite consensus disorder prediction 79 103 - -
Mupr9695g00004 498 MobiDBLite consensus disorder prediction 1 103 - -
Mupr9695g00004 498 MobiDBLite consensus disorder prediction 41 78 - -
Mupr9695g00004 498 MobiDBLite consensus disorder prediction 343 358 - -
Mupr9695g00004 498 MobiDBLite consensus disorder prediction 233 250 - -
Mupr9695g00004 498 PANTHER OS11G0578200 PROTEIN 1 496 IPR044592 -
Mupr9695g00004 498 MobiDBLite consensus disorder prediction 310 324 - -
Mupr9695g00004 498 Coils Coil 189 209 - -
Mupr9695g00004 498 SUPERFAMILY RING/U-box 107 174 - -
Mupr9695g00004 498 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 183 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9695g00004 Mupr-Chr9695 29639 39402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9695g00004 113 183 C3H Transcription Factor Family AT3G23060 35.135 2.30e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9695g00004 K10695 - gmx:100776547 725.317