Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9671g00001 ATGGAAGCACAAGAGTTTTTCCAGAACACCTTCTGCCCTCAATTCCCCTCCGACAACATGACACCCTCCAACGCCAACGCTTCCGCCGCCGACCACTTCATCGTCGAAGACTTCTTTGACTTCTCCAACGACGACGAACCTGCCATCACCGACGCCACCTTCGACTCCCTTCCCACCGACGACTCTTCCACCGTAACCCCCGTCGACAGCAGCACCAAGTCCAATTTTCCGACCCCCGATGGCCATTTCTCCGGTGACCTCTCCGTCCCGTACGATGATCTTGCTGAATTGGAATGGCTGTCCAAATTCGCCGATGAATCATTTTCGAACGAGGATTTGCAGAAGATGCAGCTGATTTCGGGCGTGAGAGTGCAAAACGACGCCGCCGCATCATCGCAAAGGCGTGACGGTGACCCAAACCTGGTGTTCAACCCGCAAGTGTCGGTTCCGGGGAAGGCCCGGAGCAAGAGGTTTCGTGGGCCCCCATGCAATTGGACCTCTCGCCTCGTTGTCCTCTCTCCGACAACTTCTCATTCCGACTCCGTTAAGAAGCCCGCGCCGCGGAGGAGGGATGCCGCCGAGGGAGGGGAGGGCCGGAAGTGTCTGCATTGCGCCACGGATAAGACGCCGCAGTGGCGGACTGGGCCCATGGGCCCGAAGACGCTCTGCAATGCGTGCGGCGTGAGATACAAGTCGGGCAGGCTCGTGCCCGAGTACAGGCCCGCTTCGAGCCCGACGTTCATGCTGACGAAGCACTCCAACTCGCACCGTAAGGTTCTGGAGCTCCGACGCCAGAAGGAAATGGTGAGGGTCCAGCAACAGCAGTTGCTCCAATTGCAACATCAGCAGAACATGATGTTCGATGTCGCATCCAACGGTGACGATTACTTGATCCATCAACACGTGGGCCCCGATTTCACGCACCTCATC 930 0.5817 MEAQEFFQNTFCPQFPSDNMTPSNANASAADHFIVEDFFDFSNDDEPAITDATFDSLPTDDSSTVTPVDSSTKSNFPTPDGHFSGDLSVPYDDLAELEWLSKFADESFSNEDLQKMQLISGVRVQNDAAASSQRRDGDPNLVFNPQVSVPGKARSKRFRGPPCNWTSRLVVLSPTTSHSDSVKKPAPRRRDAAEGGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFMLTKHSNSHRKVLELRRQKEMVRVQQQQLLQLQHQQNMMFDVASNGDDYLIHQHVGPDFTHLI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9671g00001 310 Coils Coil 262 282 - -
Mupr9671g00001 310 MobiDBLite consensus disorder prediction 182 198 - -
Mupr9671g00001 310 MobiDBLite consensus disorder prediction 52 84 - -
Mupr9671g00001 310 PIRSF Txn_fac_GATA_plant 1 292 IPR016679 GO:0003677|GO:0005634|GO:0045893
Mupr9671g00001 310 MobiDBLite consensus disorder prediction 174 198 - -
Mupr9671g00001 310 FunFam GATA transcription factor 175 277 - -
Mupr9671g00001 310 MobiDBLite consensus disorder prediction 55 81 - -
Mupr9671g00001 310 SMART GATA_3 195 245 IPR000679 GO:0006355|GO:0043565
Mupr9671g00001 310 CDD ZnF_GATA 200 247 IPR000679 GO:0006355|GO:0043565
Mupr9671g00001 310 PANTHER GATA TRANSCRIPTION FACTOR 24 274 - -
Mupr9671g00001 310 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 196 259 - -
Mupr9671g00001 310 ProSitePatterns GATA-type zinc finger domain. 201 226 IPR000679 GO:0006355|GO:0043565
Mupr9671g00001 310 Pfam GATA zinc finger 201 234 IPR000679 GO:0006355|GO:0043565
Mupr9671g00001 310 Gene3D - 195 246 IPR013088 GO:0006355|GO:0008270
Mupr9671g00001 310 ProSiteProfiles GATA-type zinc finger domain profile. 195 231 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9671g00001 Mupr-Chr9671 17263 18448 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9671g00001 27 310 C2C2-Gata Transcription Factor Family AT4G32890 50.162 2.50e-91 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr9671g00001 GATA 2.7e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9671g00001 - - gmx:100775634 472.626