Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr966g00004 ATGGGTGATGGTATCATGGTGCATACAAACATGATGATGACTCCAAACTTGAACTTGGAACCTGAAAATCAATCAGAAGGCAGCAGCCAAGTGGCTTCCAATGTATCCTTCCATGAAGCATCTCATGATCTTACAAAGGGCAGCACCACCACTTCCTCCTGTCTCACAAAGGATGAAGCTGAACCAGGTTCTATTACTCTTGACTTGACACTCAACTTCAATTCAAGTGATGGAGAGTTGAAAGGCTCAAGTGATGCTAGCAGTGAAGTGGGAGCTGAGGCTCCTGCTTCAGCATCAGCAACTCCCAGGGTTTTCTCTTGTAACTACTGCAGGAGGAAGTTCTATAGCTCACAGGCATTAGGGGGCCATCAAAATGCTCATAAAAGGGAGAGGACAATGGCTAAGCGCGCAATGCGAATGGGGATGTTCACTGAGAGGTACACAAGCTTGGCATCTCTACCTCTTCATGGTTCACCTTTTCGGTCTCTTGGCCTTGAAGCTCATTCTGCAATGCACCAAAGACACGTGCCGTCCTCACTGAGGGCTCCTGACATGAGAGCTGCTGCAAGATTTGAGAAAAACCATTTTGGATCACTAGTTTTCATGGAGGATGATGATGTTGGATTCTTTTGGCCTGGCAGTTTCAGACAGGTAGACCAAGGAGCTGGTGTTAATGTAGGACATGCTCAAACTTCAAATTCAAATGCTAGTTTAGTTCCAATGGTGCCCCTTCCACCACAAGCTTCTGCATCTCCTGATCTCACATTGAAGCTCTAA 777 0.4633 MGDGIMVHTNMMMTPNLNLEPENQSEGSSQVASNVSFHEASHDLTKGSTTTSSCLTKDEAEPGSITLDLTLNFNSSDGELKGSSDASSEVGAEAPASASATPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSPFRSLGLEAHSAMHQRHVPSSLRAPDMRAAARFEKNHFGSLVFMEDDDVGFFWPGSFRQVDQGAGVNVGHAQTSNSNASLVPMVPLPPQASASPDLTLKL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr966g00004 258 FunFam Zinc finger protein 2 82 151 - -
Mupr966g00004 258 SUPERFAMILY beta-beta-alpha zinc fingers 103 133 IPR036236 -
Mupr966g00004 258 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 26 178 IPR044246 GO:0009788
Mupr966g00004 258 ProSitePatterns Zinc finger C2H2 type domain signature. 107 127 IPR013087 -
Mupr966g00004 258 ProSiteProfiles Zinc finger C2H2 type domain profile. 105 132 IPR013087 -
Mupr966g00004 258 Gene3D Classic Zinc Finger 83 151 - -
Mupr966g00004 258 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr966g00004 Mupr-Chr966 30195 34534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr966g00004 99 258 C2H2 Transcription Factor Family AT1G66140 45.699 1.42e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr966g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr966g00004 - - gmx:100775305 454.521