Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9664g00001 ATGCAGAATCGGTGCGTTAACATGATAGCCCATCTTTTTAACGCTCCACTAGGGGAGTCTGAGGCTGCAGTTGGTGTTGGCACCGTTGGCTCATCAGAGGCCATCATGTTGGCTGGATTGGCATTCAAAAGAAAGTGGCAAAACAGAAGGAAACAAGAGGGAAAGCCTTATGACAAGCCCAACATTGTCACTGGAGCCAACGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTCGAGGTGGACTTAAAAGAAGTGAAGTTGCGTGATGGGTACTATGTAATGGACCCTGAAAAGGCCGTGGAATTGGTAGATGAGAACACTATTTGTGTTGCTGCTATCCTTGGTTCCACACTAAATGGAGAGTTTGAAGATGTTAAACGCTTAAATGATCTCCTAGTTGAGAAGAATAAGGAAACTGGATGGGACACTCCCATTCATGTGGATGCAGCTAGTGGTGGGTTCATTGCCCCATTTATTTACCCAGAGCTTGAGTGGGACTTCCGGTTACCACTAGTGAAGAGCATCAATGTTAGTGGGCACAAGTATGGTCTGGTCTATGCTGGAATCGGTTGGGTTATCTGGAGAAGCAAGGAGGACTTGCCTGAGGAACTTATCTTCCATATCAACTATCTCGGAGCTGATCAACCCACCTTCACCCTTAACTTCTCCAAAGGTTCTAGCCAAGTCATTGCTCAATACTACCAACTAATTCGCCTTGGTTTTGAGGGATATAAAAACGTGATGGAAAATTGCAGAGACAACATGATAGTGCTGAAAGAGGGACTGGTGAAAACAGGGAGGTTCGAAATTGTGTCCAAAGACAATGGCGTGCCTTTGGTGGCTTTCACACTGAAAGACCACTCCCACTTTGATGAATTCCAAATCTCTGACACGCTAAGGCGCTTTGGATGGATAGTCCCAGCATACACCATGCCCCCAGACGCTCAGCACGTGACTGTGCTACGTGTCGTCATCAGAGAGGACTTCTCAAGGACCCTTGCAGAGCGCCTTGTTTCTGACGTGGAGAAAGTGCTGCATGAGCTTGACTCACTTCCAGCAAGGGTGATAAGAAGCACCAGTGTGACAACACTCAATGCAGAAGAAAATGGCAAAGTGCTGGTTGCTAAGAAGAGTGCTCTGGAGACTCAGAGGGAAATCACTGCGGTTTGGAGGAAGTTTGTGTTGGAGAGGAAGAAGCTCAATGATAAGATGAATGGTGTTTGCTAG 1230 0.4667 MQNRCVNMIAHLFNAPLGESEAAVGVGTVGSSEAIMLAGLAFKRKWQNRRKQEGKPYDKPNIVTGANVQVCWEKFARYFEVDLKEVKLRDGYYVMDPEKAVELVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYKNVMENCRDNMIVLKEGLVKTGRFEIVSKDNGVPLVAFTLKDHSHFDEFQISDTLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVSDVEKVLHELDSLPARVIRSTSVTTLNAEENGKVLVAKKSALETQREITAVWRKFVLERKKLNDKMNGVC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9664g00001 409 FunFam Glutamate decarboxylase 266 353 - -
Mupr9664g00001 409 NCBIfam glutamate decarboxylase 1 349 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mupr9664g00001 409 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 286 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mupr9664g00001 409 Gene3D - 1 265 IPR015421 GO:0003824
Mupr9664g00001 409 PANTHER GLUTAMATE DECARBOXYLASE 1 399 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mupr9664g00001 409 FunFam Glutamate decarboxylase 1 265 - -
Mupr9664g00001 409 Gene3D - 266 353 - -
Mupr9664g00001 409 SUPERFAMILY PLP-dependent transferases 1 349 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9664g00001 Mupr-Chr9664 3692 5637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9664g00001 1 409 Calmodulin-binding Proteins AT5G17330 81.509 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9664g00001 K01580 - gmx:100796533 780.4