Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9645g00005 ATGTGTAGTAGAGGGCATTGGAGACCAGCTGAAGATGATAAACTTCGAGAGTTGGTGGAACACTATGGACCCCATAATTGGAACACTATAGCTGAGAAGCTCCGAGGAAGATCAGGAAAGAGTTGTAGGCTGAGATGGTTCAACCAACTGGACCCAAGAATAAATACAAGTCCTTTCACAGAGGAAGAAGAAGATCGTCTTGTAGCTTCTCACCGAATTCATGGTAATAGATGGTCTGTTATTGCAAGACTTTTCCCTGGACGAACGGACAACGCTGTGAAGAATCATTGGCATGTCATGATGGCAAGGATTCGTCGACAAAGATCTAAACACCTTTTTTCCAAACGCACTCACCATAACACTCTTCTCTCTTTCAAATTTACCAACAACTTCCACTTTCAACCTCCAAATTCTAGTTCCTCAATGCTTCAAGATAAAAGTCAATCAGTTGAGTTCTACGATTTTCTTCAAGTAAATACGGATTCCAATAAAAGCCAAGTGACGGACAATTCCAGAAGAGATGATGAAGAAGTAAATCAAGACAGAGGTGTTCCATTCATTGATTTTTTGTCTGTTCAAGGCTAG 585 0.4085 MCSRGHWRPAEDDKLRELVEHYGPHNWNTIAEKLRGRSGKSCRLRWFNQLDPRINTSPFTEEEEDRLVASHRIHGNRWSVIARLFPGRTDNAVKNHWHVMMARIRRQRSKHLFSKRTHHNTLLSFKFTNNFHFQPPNSSSSMLQDKSQSVEFYDFLQVNTDSNKSQVTDNSRRDDEEVNQDRGVPFIDFLSVQG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9645g00005 194 PANTHER MYB PROTEIN-RELATED 4 157 - -
Mupr9645g00005 194 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Mupr9645g00005 194 Gene3D - 4 55 - -
Mupr9645g00005 194 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Mupr9645g00005 194 SMART sant 55 103 IPR001005 -
Mupr9645g00005 194 SMART sant 3 52 IPR001005 -
Mupr9645g00005 194 Pfam Myb-like DNA-binding domain 7 67 - -
Mupr9645g00005 194 FunFam MYB transcription factor 4 55 - -
Mupr9645g00005 194 Gene3D - 57 120 - -
Mupr9645g00005 194 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Mupr9645g00005 194 CDD SANT 58 101 IPR001005 -
Mupr9645g00005 194 CDD SANT 7 48 IPR001005 -
Mupr9645g00005 194 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Mupr9645g00005 194 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9645g00005 Mupr-Chr9645 39817 40559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9645g00005 1 192 MYB Transcription Factor Family AT1G17950 54.167 6.85e-82 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr9645g00005 Myb_DNA-bind_6 2.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9645g00005 K09422 - gmx:100811746 296.589