LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr9645g00003	ATGGCTGACACAAATACAAACTCAGTTGATGTGATTCTGGACTTCCTTCGGAGGAACCGATTCACCAGAGCTGAGGCAGCTCTGCGCAGCGAGATCAATAATCGTCCCGACTTGAATGGCTTCCTTCAGAAGCTCACCTTGGAAGAAAAGGCCTCAAATAATGAGGGGAAGCCTGTGCTGGAGATTCAAGGGTTGGAATCTCACGACACTCTTGAAGTTTCTAAAGAGCTGATTGTGAAGGAAATAGAGTGTGGGAATGGTCAAAATTCCACCGAAAGCAAATGGAAAACTGTTGCTCCTGCTCCCTCTATGCTGGAACGGAATAAATTGAATGAAGTGGTTGGGACAAGTGACAAGAACTTCATTTTCTCTAAGAGTTCCGAGGATGGTATGCTTGATTTATACTCGTGGAAGTTCAACCCCAGCAATGGTCCCGTGGAGCCTTACCAAAATGATGGTGCTAGTAGAGCTAATAATACTTTGAGTTTGAAGGCCACTGTATCTCAACAATCAAAATGTCAAACTAATGAAGCTGTTGACGTAATTGCTGCCAATACCAATTCAAAGTTTGGGGAGGAAAATGCTGTGCTTGCTGACAAAAAATCCTTGTGGCCAGGAAGTAGCAGTAAAGCCTCTGTGGATCTTAAGTATGACCTTGTGCAAAGCAAAGAACCTATGGAACTTGATCGGCAGTTTATATTCAATAGTTCATCTCTTAAAGTGAACTTTACAGATAATCCCTGGTCAAGAACGGATGAGAATGTGAATTCGTCTTCAGATTCGTGCAAAGATTGTTCTGTCAAGACTGTCTTCCCCTTCTCAAAAGGGGATGTGTCTACAAGCTTTGATGGCACCACTTATTCTGACAAAAAAGAGGAGAAAAAAAGGGTAGAAATTAGTGATACTAGGACATATATAAAAGAGCAGGTGGATGAATTGGGGAGGGCTATTTACTTGGTCAAGACACAAGGCAGTTCTGAACAGAAGATATTTAGCAGCCTAAGTTTTCCTCTTCCACCTGAAAATCAGAAGGAAGAGTTTCCTAGGCTTCCTCCAGTTAAACTCAAGTCAGATGATAAGCCCTTGGTTGTTAATTGGGAGGAGAAATTTGAGCGAGATGGACCAACTTCAAAACTCCCTGCTGCTGACAGCACTTTGCTTATTGGTTCATATTTGGATGTACCTATTGGACAAGAAATTAATCCTTCAGGTATGAGGAGGGCTACAGGGGGCAGTTGGTTATCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTATCAGGTTTTGCTACAGTTGGTGATGGGTTGAGTGAATCTATTGACTATCCGAATGAATATTGGGACTCCGATGAATACGATGATGATGATGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCGCATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACTGGGCATGGAAGTGTTCCAGATGCTCATGAAAGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGGGAGCGATATCTTCAGGCAAATAATGTTGAACCAGTCACAGCTACTGATGATCCTATTGGTCTATCTGTTACTGAGTATGGAAGGACTAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAGTTGAACCTGATGTGTGCAGAGCCGGTCTGGCGGGGCTTTGTTCCTCAGACAAATGAACTCATCATGCTAGGAGATGGGAGGGTTTTGAATGATAATGTAAGATCACGGTTAGAGGACATCGGTATGGATGATGATCAACATGGTTCAGTTAGGTCAATTGGGGTGGGGATCAACAGTGATGCTGCAGATATTGGTAGTGAAGTCCGTGAAAGTTTGGTCGGTGGTAGTAGTGAAGGAGATTTAGAATATTTCCGTGATCGTGATGCCGGGCTTGGTGGTTCCAAGCACTCTCATCATGATTTGGATAAGAAATCTACTAACAAATCAAACAAAAATAAGAACAATGACAAGAGTGAGTCAAATAAATATGTCATAGGATGTGATAAAGATGCACTGTTGCAGATGAAAACTCATGGTGATGGGAACTTCTCATTTCCCCTATCTTTGAAGGATGGCCAAACGATTCAGGCTGCCACCAATAAATCCCTGTGGTCAAATAATGGCAATGCAGATGAAACTGATGACTGTCTTAGTGCATTTGTGGGAACTGATGACATGCTTGCTTCATGGAGGCGAAAGAGAAGTGATTCTTCACCTGTTAAAAGTTCTAGGGATGAGAATAATATGGTAAGGTCCACAAACTCTTCTCCAACAACGGTCTCAAATTATGGATATTCTGAAAGAGAGCATGTGAAGGTAGAAGAGGATGAAAAGGCTGGAATTGCAAGGGAAGATGATCTAGGAGCATCGCTAGAGGATGAAGAGGTAGCTGCTGTGCAAGAGCAAGTAAGGCAGATAAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGGCATGTTTTTAATGTAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTATTAGCTGGAAGGTATCATGTTACTGAGTATCTGGGATCTGCTGCATTTAGTAAAGCCATACAAGCTCATGACCTACATACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTTTTTGACCAAAGTCTTGATGAGATAAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGCAGACAAGTATCACATTCTTCGATTATATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTGTATGAGTTTCATAAATTTAATAGAGAATCAGGTGGTGAAGTGTACTTTACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTAAGTTTTTGCATAGCCTTGGACTAATACACTGCGACTTGAAACCAGAGAATATTTTGGTTAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTCGAAACAGATCACCTTTGCTCTTATGTCCAATCAAGGTCCTATCGTGCTCCTGAGGTTATATTGGGACTTCCGTATGACAAGAAGATTGATATCTGGTCACTTGGCTGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGTCCAATTGATCAAACTATGCTTGCAAAAGGACGGGACACATATAAGTACTTCACCAAAAATCATATGCTTTATGAAAGGAATCAGGAAAGCAACAGGTTAGAATACTTGATTTCAAAAAAGACATCATTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCTCACTTGCTTGAAGTCAACCCTAAGAAGCGGCCCTCAGCATCTGAGGCCCTGAAGCATCCATGGTTATCATACCCTTACGAACCAATATCATCTTGA	3573	0.412	MADTNTNSVDVILDFLRRNRFTRAEAALRSEINNRPDLNGFLQKLTLEEKASNNEGKPVLEIQGLESHDTLEVSKELIVKEIECGNGQNSTESKWKTVAPAPSMLERNKLNEVVGTSDKNFIFSKSSEDGMLDLYSWKFNPSNGPVEPYQNDGASRANNTLSLKATVSQQSKCQTNEAVDVIAANTNSKFGEENAVLADKKSLWPGSSSKASVDLKYDLVQSKEPMELDRQFIFNSSSLKVNFTDNPWSRTDENVNSSSDSCKDCSVKTVFPFSKGDVSTSFDGTTYSDKKEEKKRVEISDTRTYIKEQVDELGRAIYLVKTQGSSEQKIFSSLSFPLPPENQKEEFPRLPPVKLKSDDKPLVVNWEEKFERDGPTSKLPAADSTLLIGSYLDVPIGQEINPSGMRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDAHERGPAKDEDDDQSFAEEDSYFSGERYLQANNVEPVTATDDPIGLSVTEYGRTNDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELIMLGDGRVLNDNVRSRLEDIGMDDDQHGSVRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFRDRDAGLGGSKHSHHDLDKKSTNKSNKNKNNDKSESNKYVIGCDKDALLQMKTHGDGNFSFPLSLKDGQTIQAATNKSLWSNNGNADETDDCLSAFVGTDDMLASWRRKRSDSSPVKSSRDENNMVRSTNSSPTTVSNYGYSEREHVKVEEDEKAGIAREDDLGASLEDEEVAAVQEQVRQIKAQEEEFETFNLKIVHRKNRHVFNVTGFEEDKNFHVVLNSVLAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALKFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQTMLAKGRDTYKYFTKNHMLYERNQESNRLEYLISKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS	1190

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr9645g00003	1190	FunFam	Serine/threonine-protein kinase ppk15	958	1182	-	-
	Mupr9645g00003	1190	MobiDBLite	consensus disorder prediction	483	506	-	-
	Mupr9645g00003	1190	MobiDBLite	consensus disorder prediction	758	794	-	-
	Mupr9645g00003	1190	MobiDBLite	consensus disorder prediction	483	513	-	-
	Mupr9645g00003	1190	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	1005	1017	IPR008271	GO:0004672\|GO:0006468
	Mupr9645g00003	1190	MobiDBLite	consensus disorder prediction	638	688	-	-
	Mupr9645g00003	1190	CDD	PKc_DYRK_like	879	1181	-	-
	Mupr9645g00003	1190	ProSiteProfiles	Protein kinase domain profile.	879	1181	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr9645g00003	1190	Pfam	Protein kinase domain	879	1181	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr9645g00003	1190	SMART	serkin_6	879	1181	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr9645g00003	1190	Gene3D	Transferase(Phosphotransferase) domain 1	933	1181	-	-
	Mupr9645g00003	1190	MobiDBLite	consensus disorder prediction	647	688	-	-
	Mupr9645g00003	1190	FunFam	Putative serine/threonine-protein kinase dyrk2	873	960	-	-
	Mupr9645g00003	1190	Gene3D	Phosphorylase Kinase; domain 1	873	960	-	-
	Mupr9645g00003	1190	MobiDBLite	consensus disorder prediction	769	792	-	-
	Mupr9645g00003	1190	SUPERFAMILY	Protein kinase-like (PK-like)	868	1183	IPR011009	-
	Mupr9645g00003	1190	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	413	1181	-	-
	Mupr9645g00003	1190	Coils	Coil	826	846	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr9645g00003	Mupr-Chr9645	22265	34403	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr9645g00003	878	1176	MAP Kinase Gene Family	AT5G19010	31.348	1.31e-30	126

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-PRP4	Mupr9645g00003		Pkinase	6.5e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr9645g00003	-		-	gmx:100797095	1877.83