Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9643g00006 ATGGATGAACAACAAGAAGAACCTACTATAATCTACTATGACAATAAATTGGTCATAGCAATGATGAAGAACCTAGTTCATCATCAAGGAACAAAACATATAGATATTAAATATCACTTTATTAAAAAAGCAGAGGTAACTAAGGAAATCCAACTCGTGTACTATTCAACTGAAGACCACATATTTATGAAGGCACTAGCAAGAGTCAAGTTTGAACAATTTCGGACTATGCTTGGAGTTATCGAAATTTGCATCAAGGAGGAGCGCAGTGATGTCCCAAAGGGCTACCTTGCAGTCTATGTGGGAGAAAATGAAAAGAAGCGGTTTGTGATTCCTATATCATATTTGAACCAACCTTCAATCCAAGACCTGCTAAGTCAAGCTGAACAAGAATTTGGATTTGATCATCCAAAGGGTGGCCTTACAATTCCTTGTAGAGAAGACATCTTCCTAGGTATCACTTCTCGCTTGCGTAGTCTCAGCAAATACAATACAACAATGGGTTTTCGTTTACCTGGTATCAGAAAGGCATCTTCAAAAGCTGTGGAAGTACCAAAGGGCTATCTTGCAGTCTACGTTGGAGAGAGAATGAAGCGGTTTGTGATTCCCATATCATACTTGATCCATCCTTCATTCCAAGAATTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTTACAATTCCTTGCAGCGAAGATGTCTTTCAAAACATAACTTCACACTTGAATGGACTATAA 756 0.3876 MDEQQEEPTIIYYDNKLVIAMMKNLVHHQGTKHIDIKYHFIKKAEVTKEIQLVYYSTEDHIFMKALARVKFEQFRTMLGVIEICIKEERSDVPKGYLAVYVGENEKKRFVIPISYLNQPSIQDLLSQAEQEFGFDHPKGGLTIPCREDIFLGITSRLRSLSKYNTTMGFRLPGIRKASSKAVEVPKGYLAVYVGERMKRFVIPISYLIHPSFQELLSQAEEEFGYDHPMGGLTIPCSEDVFQNITSHLNGL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9643g00006 251 CDD RNase_HI_RT_Ty1 1 68 - -
Mupr9643g00006 251 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 176 248 IPR003676 GO:0009733
Mupr9643g00006 251 Pfam Auxin responsive protein 84 155 IPR003676 GO:0009733
Mupr9643g00006 251 Pfam Auxin responsive protein 173 247 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9643g00006 Mupr-Chr9643 11987 17658 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9643g00006 183 242 Calmodulin-binding Proteins AT3G43120 56.667 4.65e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9643g00006 - K14488 gmx:112997918 218.779