Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9626g00001 ATGCACGAGGCAGCGTTTTTGGACTTGATGGATCAGTATCAGGTAGGGAGACCTCCTGTGAAGCTCCATCAAGGATGCCTCGGTCACGCTCCGTTCAAAATTGAGAGGCCGTTTGTGTGTTCTGTCGATGATTGTCAGGCAAGTTACAGAAGGAAGGACCACCTGACTCGCCACCTTCTAAAGCATCAAGGGAATAGTTTTAAGTGCCCTGTTGAGAATTGCAACACTGAATTCACTTTGCAAAGCAATATAAAAAGACATGTTGAGGAGGTTCATGATGACAGTTCTACCTCTACTAGTGACAAAAGTCACAAACAGTTTGTGTGTCCGGAGATTGGCTGTGGAAAGGTTTTCAAATATGCATCACAGCTACAAAGGCATGAAGATTCTCATGTTAAGCTGGAGTCAGTAGATGTGATATGCTTAGAACCTGGCTGCATGAAATATTTCACCAATGTCCAGTGCCTTCAAGCTCATGTTAAATCGTCCCATCAGTATATGACTTGTGACATTTGTGGGACTAAGCAACTGAAGAAGAATATTAAGCGTCACCTTCGCACACATGAAGCCAGCAGTTCACCAGAGACCTTTCAATGCGAGTTTAAGGGTTGTAGCTGCACATTCTCAACAAAATCTAATCTTGATAAGCATAAGAAGGTTGTGCACTTTAAAGAAAAGCCTTTTCTGTGTGGGTTTCCTGATTGTGGCATGAGATTTGCTTACAAACATGTGCGAGATAATCACGAAAAAACTGCTAAACATGTTTTTACCCTTGGGGATTTTGAAGAAGCTGATGAAGAGTTCAGGTCAAGGCCGAGGGGAGGGAAGAAGAGAACATACCCTACCGTTGAAATGTTAATTAGGAAGAGGGTTACCCCACCTAGTCAATTGGAGGATTGGTTGTTTATGCAGGATAGTGAGTAG 924 0.4297 MHEAAFLDLMDQYQVGRPPVKLHQGCLGHAPFKIERPFVCSVDDCQASYRRKDHLTRHLLKHQGNSFKCPVENCNTEFTLQSNIKRHVEEVHDDSSTSTSDKSHKQFVCPEIGCGKVFKYASQLQRHEDSHVKLESVDVICLEPGCMKYFTNVQCLQAHVKSSHQYMTCDICGTKQLKKNIKRHLRTHEASSSPETFQCEFKGCSCTFSTKSNLDKHKKVVHFKEKPFLCGFPDCGMRFAYKHVRDNHEKTAKHVFTLGDFEEADEEFRSRPRGGKKRTYPTVEMLIRKRVTPPSQLEDWLFMQDSE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9626g00001 307 Gene3D Classic Zinc Finger 103 168 - -
Mupr9626g00001 307 ProSitePatterns Zinc finger C2H2 type domain signature. 199 222 IPR013087 -
Mupr9626g00001 307 ProSitePatterns Zinc finger C2H2 type domain signature. 230 254 IPR013087 -
Mupr9626g00001 307 Pfam Zinc finger, C2H2 type 107 131 IPR013087 -
Mupr9626g00001 307 Pfam Zinc finger, C2H2 type 197 222 IPR013087 -
Mupr9626g00001 307 Pfam Zinc finger, C2H2 type 38 62 IPR013087 -
Mupr9626g00001 307 ProSitePatterns Zinc finger C2H2 type domain signature. 141 164 IPR013087 -
Mupr9626g00001 307 SMART c2h2final6 197 222 IPR013087 -
Mupr9626g00001 307 SMART c2h2final6 107 131 IPR013087 -
Mupr9626g00001 307 SMART c2h2final6 67 92 IPR013087 -
Mupr9626g00001 307 SMART c2h2final6 228 254 IPR013087 -
Mupr9626g00001 307 SMART c2h2final6 139 164 IPR013087 -
Mupr9626g00001 307 SMART c2h2final6 38 62 IPR013087 -
Mupr9626g00001 307 SMART c2h2final6 167 188 IPR013087 -
Mupr9626g00001 307 SUPERFAMILY beta-beta-alpha zinc fingers 179 236 IPR036236 -
Mupr9626g00001 307 PANTHER ZINC FINGER PROTEIN 21 295 - -
Mupr9626g00001 307 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 67 IPR013087 -
Mupr9626g00001 307 SUPERFAMILY beta-beta-alpha zinc fingers 104 133 IPR036236 -
Mupr9626g00001 307 Gene3D Classic Zinc Finger 65 102 - -
Mupr9626g00001 307 ProSitePatterns Zinc finger C2H2 type domain signature. 69 92 IPR013087 -
Mupr9626g00001 307 Gene3D Classic Zinc Finger 192 257 - -
Mupr9626g00001 307 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 136 IPR013087 -
Mupr9626g00001 307 SUPERFAMILY beta-beta-alpha zinc fingers 35 64 IPR036236 -
Mupr9626g00001 307 ProSitePatterns Zinc finger C2H2 type domain signature. 109 131 IPR013087 -
Mupr9626g00001 307 ProSiteProfiles Zinc finger C2H2 type domain profile. 197 227 IPR013087 -
Mupr9626g00001 307 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 97 IPR013087 -
Mupr9626g00001 307 ProSitePatterns Zinc finger C2H2 type domain signature. 40 62 IPR013087 -
Mupr9626g00001 307 Gene3D Classic Zinc Finger 29 64 - -
Mupr9626g00001 307 SUPERFAMILY beta-beta-alpha zinc fingers 66 93 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9626g00001 34 257 C2H2 Transcription Factor Family AT1G72050 51.449 9.01e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr9626g00001 zf-C2H2 0.0068 CL0361