Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9624g00007 ATGAGAAGAAGAGGCAGAGAGCTTCTCAGCCTCTCTTTTTCTCTACACTCACCATTAAAGCACAACATTTTAGCAAAATCAGCACCACCCACTTATTTCTTTCAAAGCAGCATCACTTTCTCAACCTCTTCCTCCTCCATAACCCCTCCTATCGAAGAGCCAAAAACTTCACCATCCAAGTCCCCAAGGGATTCACTGGTTTTGGAACAGTTCAAGCAAAGGAAACTCAAAGGGTCTTCAAAAGACTCGAAGGGTACCCCCCAAGTGTGTTCGACTTCGGTCTCATTAAGTTCGGATGCTGATACCGAGAAGGTGGTCCCAGAGGGTGTGCAGAATGAGAATGACCGCACCATGGTGGTTGCAAGTTTCAAGGAGTTGGGTGTAAGTGAGGAGCTTGTTGGGGTCATGGAGGGCATTGGTGTGTTTGCTCCCAGTGAGATACAGTGTGTGGCTATTCCTGCTATTTTGGAAGGGAAGAGTGTTTTGTTGAGTTCACCATCTGAACCTGACAGAACCTTGGCCATCTTGTTGCCCCTTATTCAGCTGCTAAGACGGGATAGACTAAGAGAGTTGCTTGGTTCAAATTCAAAGCATCCACGAGCCATCGTGCTTTGTGCTACAGAGGACAACGCTGCACAGTGCTTTAATGCTGCAAAATATATCATCCATAATGCAGAATTGAAGTCTGCGAAGGATTGTGCTTCACCAGATAACGGGCAGCCACAAGCCTCAATCGGCCTCATGATTGGAACTCCTTGTGAGATTCTTCAGTACATTGAAGAGGGAAGTGTTGTTCCTGCTAAAATAAGATACTTGGTGTTGGATGAGGCAGATTGCATGCTTGGTAGTGGCCTTGGTCCTGAAATCCACAAAATTCTCAGACCATTACAAGATCATGAATCAAAATCTTCTGTCAAAAGATTACAAACTATATTGGCAATTTCAACAATAGCTGAGGTTTTGGGTGAACAATCCCCCGTTGTAAAGCATCTTCAGTGCCATCATGCAGGAAATATTTCTGCTATGTCGTTAGAAATGGAACGAACAGAAGTCTTTCATTTCACAGAGTCTCTTCATGCTCTTAGGAAAAAAGTGGCAGAGGCCATGAATTCCCTTTTGAAACAACAGTATGATGGGGTGACATCTGATATGAATAGATGA 1161 0.4427 MRRRGRELLSLSFSLHSPLKHNILAKSAPPTYFFQSSITFSTSSSSITPPIEEPKTSPSKSPRDSLVLEQFKQRKLKGSSKDSKGTPQVCSTSVSLSSDADTEKVVPEGVQNENDRTMVVASFKELGVSEELVGVMEGIGVFAPSEIQCVAIPAILEGKSVLLSSPSEPDRTLAILLPLIQLLRRDRLRELLGSNSKHPRAIVLCATEDNAAQCFNAAKYIIHNAELKSAKDCASPDNGQPQASIGLMIGTPCEILQYIEEGSVVPAKIRYLVLDEADCMLGSGLGPEIHKILRPLQDHESKSSVKRLQTILAISTIAEVLGEQSPVVKHLQCHHAGNISAMSLEMERTEVFHFTESLHALRKKVAEAMNSLLKQQYDGVTSDMNR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9624g00007 386 Gene3D - 91 322 IPR027417 -
Mupr9624g00007 386 MobiDBLite consensus disorder prediction 82 100 - -
Mupr9624g00007 386 MobiDBLite consensus disorder prediction 42 66 - -
Mupr9624g00007 386 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 60 318 - -
Mupr9624g00007 386 Gene3D - 323 375 - -
Mupr9624g00007 386 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 152 335 IPR014001 -
Mupr9624g00007 386 MobiDBLite consensus disorder prediction 67 81 - -
Mupr9624g00007 386 SUPERFAMILY PABC (PABP) domain 319 372 IPR036053 GO:0003723
Mupr9624g00007 386 SMART poly_2 313 376 IPR002004 GO:0003723
Mupr9624g00007 386 MobiDBLite consensus disorder prediction 42 109 - -
Mupr9624g00007 386 Pfam DEAD/DEAH box helicase 146 313 IPR011545 GO:0003676|GO:0005524
Mupr9624g00007 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 313 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9624g00007 Mupr-Chr9624 26375 30380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9624g00007 120 296 Eukaryotic Initiation Factors Gene Family AT3G19760 26.374 4.39e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9624g00007 - - vra:106768009 552.362