Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9621g00003 ATGAGACATCAATTACTAAGCTATATCATCAAGAGAACAAACATGGGTGTGCTTTCGCTAAGGTCCCTTTCCTTTATTTGTTGTCTCCTCCTCGTAACAAATTTTATATCTGAAGGCAGAGCCAATAACAACTCACAAAACTATCACTACTTTTGTGATCACAATAACGATAGAGGAAACTACACAACCAACAGCACCTATGACACAAACCTGAACACCCTTTTGTCCACTCTCACTTCCAATACAGAAATCGACTACGGTTTCTACAATTTCACAAACGGCGAAAACAGTGACAAAGTGTACGCCATTGGGCTGTGCAGAGGAGATGTTAAGGCAGATGAATGCCGTAACTGCCTTAAACAATCGAGAGCCAATCTAACACAGCTTTGCCCAAACCGGAAGGAAGCAATTGGGTGGTACGAGGATGAGAAATGCATGTTGCGCTACTCAAACAGATCAATATTTGGCCACAACGAAATTGGACCTGCGTATTTTGCGTGGAGCTCAATCAATGCAACGCAAGTGGAGCAGTTCAAAAGCGTGGTCAACAACTTGCTGCAAAGCTTGAAAACCAAAGCTGGATTAGGCGACTCTCGTAGTAAATATGCTACAAATAATGTAACTGGTCCTGATAACAAAATCATATATGGGCTTGTACAGTGCACGCCTGATTTGTCTGGGCCAGACTGTGATAACTGCTTGGAGCAGTCCATCAACGAAGCCCAAAACTATAAGGCGGCGATAGGTGTTAGAATTGTTAGGCCCAGTTGTAATCTCAGATACGAAACCTCCTCACTGTTCTATGGGCCTCCAGCATATGCATCATCCCCATCTCCATCTCCATCTCCATCACCATTTCCCTTGTCGCCGACCTCCACCGTCACTAGTAACACTTCCTCGGAAGTTAGCGCCAATAACAATTCACAAAACTTCCACTACTTCTGTGAAGAAGATAACGATAGAGGAAACTACACAGCCAACAGCACCTATCATGCGAACCTCGACACCCTTTTGTCCACTCTCATTTCCAACACAGAAATCGACTACGGTTTCTACAATTTCACGAAGGGCGAAAACACTGACAAAGTGTACGCCATCGGGCTGTGTAGAGGTGATATTAAGCCAGATGAATGCCGCATTTGCCTCAACGGTTCCAGAGCCAATCTCACACAGCTTTGTCCAAACCGGAAGGAAGCAATTGGGTGGTTTGAGGATGAGAAATGCATGTTGCGCTACTCAAACAGATCAATATTTGACCTCATGGAAATTGGACCTGCGTATTATGCTCACAACGGGGAAAATGCAACGGACTTGAATCAGTTCAATGAAGATGTCAACTCCTTGTTGGGTAACTTAAAAAGCAAAGCTGCATCAGGTGACTCTCGTGTTAAGTATGCTGTAGGAAGTATATCTGCACCTAATGATCAGGTCATATATGGTCTTGTTCAGTGCACGCCGGACTTGTTAGGGTCAGAGTGCGATGATTGCTTGGCTCAGTCCATTGCACGCATCCCAATAGATTGTTGTAAAGACAGCAAAGGTGGTAGGGTTGTCAGACCCAGTTGCAATATGAGGTTCGAAACCTCCTTTCGTTTTTATGGACCTACAGCATATGTACCGTCAACTCCCCCTTCCAACACTTCGCCAAAAGGAAAAAGCAACACAACTACCATCATCATAGCAATAGTAGTACCAGTTGTTGCTGTGGTGGTGCTCATTTTTATCTTCATCTGTTTAAGAGTGAGGAAGCCAGGGGAAAAGCTTAAAACTCAAGAAGAAGAAGAAGAATATGATGATGATGAAATTGACATTTCTGAGTCATTGCAATTCAGCTTTAACACCATACGAGATATTACTGATGACTTTTCTTATTCTAATAAACACGGGCAGGGCGGATTTGGGGCTGTTTACAGGGGTCAGCTTGCCGACGGACAAGAGATTGCTGTCAAAAGGTTGTCAAGGAATTCTGGGCAAGGAGACATGGAATTTAAGAACGAAGTGCTTTTAGTGGCCAAGCTTCAGCACCGAAATTTAGTTAGGCTACTTGATGAAACCAAAAGAACAGTATTAGATTGGGAAAAGCGCTACAAAATCATTGCAGGTACTGCTCGAGGCATTCTCTACCTTCATCAAGATTCTCGATTGCGCATTATTCATCGTGATCTTAAAGCAAGTAACATTCTCTTGGACGAAGAAATGAATCCTAAAATAGCAGATTTTGGCTTAGCAAGACTTGGATACATGGCACCTGAGTATGCAATGCATGGACAGTTTTCAGAAAAGTCAGATGTTTTTAGTTTTGGTGTATTGGTTCTTGAGGTTGTAAGTGGCCAGAAAAACAGTGGCATTCGTCACGGAGAGAATATAGAGGATCTACTAAGTTTTGCATGGCGAAATTGGAAGGAAGGAAGAGCTATAGATATCGTAGATCCAACGCTAAACAATCATTCACAAAATGAAATTATGAGATGCATCCACATCGGGTTACTCTGCGTTCAAGATAAT 2505 0.4295 MRHQLLSYIIKRTNMGVLSLRSLSFICCLLLVTNFISEGRANNNSQNYHYFCDHNNDRGNYTTNSTYDTNLNTLLSTLTSNTEIDYGFYNFTNGENSDKVYAIGLCRGDVKADECRNCLKQSRANLTQLCPNRKEAIGWYEDEKCMLRYSNRSIFGHNEIGPAYFAWSSINATQVEQFKSVVNNLLQSLKTKAGLGDSRSKYATNNVTGPDNKIIYGLVQCTPDLSGPDCDNCLEQSINEAQNYKAAIGVRIVRPSCNLRYETSSLFYGPPAYASSPSPSPSPSPFPLSPTSTVTSNTSSEVSANNNSQNFHYFCEEDNDRGNYTANSTYHANLDTLLSTLISNTEIDYGFYNFTKGENTDKVYAIGLCRGDIKPDECRICLNGSRANLTQLCPNRKEAIGWFEDEKCMLRYSNRSIFDLMEIGPAYYAHNGENATDLNQFNEDVNSLLGNLKSKAASGDSRVKYAVGSISAPNDQVIYGLVQCTPDLLGSECDDCLAQSIARIPIDCCKDSKGGRVVRPSCNMRFETSFRFYGPTAYVPSTPPSNTSPKGKSNTTTIIIAIVVPVVAVVVLIFIFICLRVRKPGEKLKTQEEEEEYDDDEIDISESLQFSFNTIRDITDDFSYSNKHGQGGFGAVYRGQLADGQEIAVKRLSRNSGQGDMEFKNEVLLVAKLQHRNLVRLLDETKRTVLDWEKRYKIIAGTARGILYLHQDSRLRIIHRDLKASNILLDEEMNPKIADFGLARLGYMAPEYAMHGQFSEKSDVFSFGVLVLEVVSGQKNSGIRHGENIEDLLSFAWRNWKEGRAIDIVDPTLNNHSQNEIMRCIHIGLLCVQDN 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9621g00003 835 ProSiteProfiles Protein kinase domain profile. 622 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9621g00003 835 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 27 277 - -
Mupr9621g00003 835 Gene3D Transferase(Phosphotransferase) domain 1 681 835 - -
Mupr9621g00003 835 MobiDBLite consensus disorder prediction 274 288 - -
Mupr9621g00003 835 SMART serkin_6 622 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9621g00003 835 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 308 417 - -
Mupr9621g00003 835 SUPERFAMILY Protein kinase-like (PK-like) 604 832 IPR011009 -
Mupr9621g00003 835 ProSiteProfiles Gnk2-homologous domain profile. 49 154 IPR002902 -
Mupr9621g00003 835 MobiDBLite consensus disorder prediction 289 304 - -
Mupr9621g00003 835 ProSiteProfiles Gnk2-homologous domain profile. 160 266 IPR002902 -
Mupr9621g00003 835 Pfam Salt stress response/antifungal 315 414 IPR002902 -
Mupr9621g00003 835 Pfam Salt stress response/antifungal 52 151 IPR002902 -
Mupr9621g00003 835 Pfam Salt stress response/antifungal 433 528 IPR002902 -
Mupr9621g00003 835 Pfam Salt stress response/antifungal 171 263 IPR002902 -
Mupr9621g00003 835 FunFam Lectin-domain containing receptor kinase A4.3 673 835 - -
Mupr9621g00003 835 FunFam Cysteine-rich receptor-like protein kinase 10 162 266 - -
Mupr9621g00003 835 ProSiteProfiles Gnk2-homologous domain profile. 312 417 IPR002902 -
Mupr9621g00003 835 Gene3D Phosphorylase Kinase; domain 1 583 680 - -
Mupr9621g00003 835 FunFam Cysteine-rich receptor-like protein kinase 10 425 531 - -
Mupr9621g00003 835 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 45 154 - -
Mupr9621g00003 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 717 729 IPR008271 GO:0004672|GO:0006468
Mupr9621g00003 835 MobiDBLite consensus disorder prediction 272 304 - -
Mupr9621g00003 835 Gene3D - 48 153 IPR038408 -
Mupr9621g00003 835 Gene3D - 425 530 IPR038408 -
Mupr9621g00003 835 Gene3D - 163 265 IPR038408 -
Mupr9621g00003 835 Gene3D - 293 416 IPR038408 -
Mupr9621g00003 835 Pfam Protein tyrosine and serine/threonine kinase 625 682 IPR001245 GO:0004672|GO:0006468
Mupr9621g00003 835 Pfam Protein tyrosine and serine/threonine kinase 684 779 IPR001245 GO:0004672|GO:0006468
Mupr9621g00003 835 ProSiteProfiles Gnk2-homologous domain profile. 423 531 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9621g00003 Mupr-Chr9621 2895 17281 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9621g00003 311 835 Receptor kinase-like Gene Family AT4G21410 46.523 3.61e-160 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr9621g00003 PK_Tyr_Ser-Thr 7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9621g00003 - - var:108324787 775.778