Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9619g00003 ATGGGCGGTTGCTGTTGTTCTCCCAAAGACACTGAATTTAGCGCTGCTCCACCTGCACACTGCCACAACCCAAGAGTATCAGAGGAGCATGTCCCGCCATCATCTCACTGTGGTGCTGCTCCTGCTGTTTCCTGGGAACTCTTAGTTGATACTAATCTAGACACTTCAAGTCCTGACACTCACAAACCGCCTCTTACTCCTGTCCCTTTCAATGTTCCTTTAGGTGTCTCTCAAACTCCACCTGTAGCTCAAGAAATTTGTGGTGACAAGACTGATCCATCTCTGCAAACTACAAATTCTAATTCAACTCAAGAAACAGTTGCTGGGGACAATCATGGGGCCTCAGCTAAGTCCGAAAAGGTTAAGGAATCGGAATGCAAAGTCCTCCAGAGTGCTTTAGAACTTGACTCGGCAGTGGATTCTGAAATTGATCTTCCAAAGTCGGCAAAACCTTTCATTTTAGTGGAAGAGGAGGATGCATGCCCAATTTGTTTAGAAGAGTATGATGCAGAGAATCCAAAACTCTCCACAAAATGTGACCATCATTTCCACCTTGCATGCATTCTTGAATGGATGGAAAGAAGTGAAACTTGTCCTGTGTGTGATCAGTTTTCTTTGTTTCCTGAGAGTTTGTTCCTTCTTTTGTCCCCAGTACCTTGTTCAAAGAAAAGTAAACATACCATGACCATACCCGATTGGCTGGGTTCCAAACTTCATTCCATTTCATAG 729 0.4417 MGGCCCSPKDTEFSAAPPAHCHNPRVSEEHVPPSSHCGAAPAVSWELLVDTNLDTSSPDTHKPPLTPVPFNVPLGVSQTPPVAQEICGDKTDPSLQTTNSNSTQETVAGDNHGASAKSEKVKESECKVLQSALELDSAVDSEIDLPKSAKPFILVEEEDACPICLEEYDAENPKLSTKCDHHFHLACILEWMERSETCPVCDQFSLFPESLFLLLSPVPCSKKSKHTMTIPDWLGSKLHSIS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9619g00003 242 SUPERFAMILY RING/U-box 151 208 - -
Mupr9619g00003 242 ProSiteProfiles Zinc finger RING-type profile. 161 202 IPR001841 -
Mupr9619g00003 242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 208 IPR013083 -
Mupr9619g00003 242 SMART ring_2 161 201 IPR001841 -
Mupr9619g00003 242 FunFam Putative E3 ubiquitin-protein ligase RHB1A 138 206 - -
Mupr9619g00003 242 Pfam Ring finger domain 160 201 IPR001841 -
Mupr9619g00003 242 MobiDBLite consensus disorder prediction 90 111 - -
Mupr9619g00003 242 MobiDBLite consensus disorder prediction 88 120 - -
Mupr9619g00003 242 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 41 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9619g00003 Mupr-Chr9619 27762 29822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9619g00003 1 211 C3H Transcription Factor Family AT5G41350 50.000 9.87e-59 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9619g00003 - - gmx:100816369 296.204