Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9597g00002 ATGGAACCCCAGAAAATTCCATTGATGGATGACAGCTTATGTGATATTTTCAAAGACACCGAGTTTGAGGACACCCACTTTGGTGGAGAGGATCTCTTTGCTATTTTGGAGAGCCTAGAAGAAGACTTGAAAGATTTTCCTCCCATCAACAATGAAGCTATTACTAGCCCAACCTCAAAAGAAAATGAGCAAAACTCAAGAATGGTGTCCCAAAAGGTCTCAATATCTTCAAGTGCTCCACAAGATTCTGAAACTGAGCTTGAAATCTCACCCAAAAGCAAGAGGCAAAAGCTTAGCCCCACCTCGCCAGAGGAACCACCGAGGATGTCTCATATAACCGTGGAGCGTAACCGAAGAAAGCAAATGAATGAGAACTTGTCCGTCTTGAGGTCACTTATGCCTTCCTTTTATGTCAAACGGTGGCACTTGAGGCTAACTTATTCCACCTATATGGTACAGGGAGACCAAGCATCAATAATTGGAGGTGTGGTTGATTACATCAATGAGTTGCAGCAGGTGCTACAATGCCTAGAGGCCAAGAAACAAAGAAAAGTTCACAATGATGTCCTAAGTCCTAGGCTAGTTTCAAGCCCAAGACCTTCACCACTAAGTCCTAGAAAACCACCATTGAGCCCTAGAATAAACCTGCCCATTAGTCCAAGGACTCCACAACCATGTAGCCCTTACAAGCCAAGGTTGCAGCAAGGTTACCTTTCCCCAACCATAGCCAACTCTCCTACTTCTTCTGCTTCTTCTTCCATCAACGATAATATCAACGAGCTTGTTGCCAATTCCAAGTCTCTTATCGCCGATGTTGAGGTCAAGTTTTCAGGACCACATGTTCTTCTGAAGACTTTGTCGCCACCAATTCCCGGACAGGCTCTGAGAATAATATCAGCTCTTGAAGACCTAGCGCTCGAAATCCTCCATGTGAACATTAGCACAGCTGATGAAACCATGCTAAACTCATTCACTATTAAGATTGGAATTGAATGCCAGCTCAGTGCCGAAGAACTCGCTCAACAAATCCAGCAAACATTCTGCTAA 1047 0.4413 MEPQKIPLMDDSLCDIFKDTEFEDTHFGGEDLFAILESLEEDLKDFPPINNEAITSPTSKENEQNSRMVSQKVSISSSAPQDSETELEISPKSKRQKLSPTSPEEPPRMSHITVERNRRKQMNENLSVLRSLMPSFYVKRWHLRLTYSTYMVQGDQASIIGGVVDYINELQQVLQCLEAKKQRKVHNDVLSPRLVSSPRPSPLSPRKPPLSPRINLPISPRTPQPCSPYKPRLQQGYLSPTIANSPTSSASSSINDNINELVANSKSLIADVEVKFSGPHVLLKTLSPPIPGQALRIISALEDLALEILHVNISTADETMLNSFTIKIGIECQLSAEELAQQIQQTFC 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9597g00002 348 Gene3D - 100 195 IPR036638 GO:0046983
Mupr9597g00002 348 SMART finulus 112 176 IPR011598 GO:0046983
Mupr9597g00002 348 PANTHER TRANSCRIPTION FACTOR FAMA 12 347 IPR044283 GO:0003700|GO:0010052
Mupr9597g00002 348 MobiDBLite consensus disorder prediction 51 86 - -
Mupr9597g00002 348 MobiDBLite consensus disorder prediction 45 113 - -
Mupr9597g00002 348 MobiDBLite consensus disorder prediction 87 101 - -
Mupr9597g00002 348 MobiDBLite consensus disorder prediction 198 226 - -
Mupr9597g00002 348 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 104 189 IPR036638 GO:0046983
Mupr9597g00002 348 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 106 170 IPR011598 GO:0046983
Mupr9597g00002 348 Coils Coil 167 187 - -
Mupr9597g00002 348 Pfam Helix-loop-helix DNA-binding domain 108 171 IPR011598 GO:0046983
Mupr9597g00002 348 MobiDBLite consensus disorder prediction 189 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9597g00002 Mupr-Chr9597 12882 15641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9597g00002 9 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 49.465 5.57e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr9597g00002 HLH 2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9597g00002 K20558 - gmx:100809717 508.834