Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9596g00001 ATGGTTTTACCAGTTAGTCCACTTTGGCGTAGTGGACCAGAAGACAAGCCAGTGTTGTGCAACGCATGTGGATCAAGATACAAGAAATGGGGAAATCTTGAGAGGTATCTTCCCAACCATTTTCAACCAAAGCATCTTGATAAACTTAAAAGTCTGAAGGGTAGTAGAAGCAATCTCCTTGTTTCAAGTTATGAAACAGGTGGGAAAACTGCACGTTTATGGAGTCCTAAGATCCCTTCAAGGAAACGTTCACGGGTGGTGTACCAGAAGATAACACCAATGAAGAGGTTTCATAAACAACTTCTCAGTATGTGGGAAAATTATGGGAACCCAAATGAGTCATCCCCGGAAGAGCACATTCATATGGTGAGAAACTCTAACCACCTTCCATATGGTGAGAAACTCTAA 408 0.4191 MVLPVSPLWRSGPEDKPVLCNACGSRYKKWGNLERYLPNHFQPKHLDKLKSLKGSRSNLLVSSYETGGKTARLWSPKIPSRKRSRVVYQKITPMKRFHKQLLSMWENYGNPNESSPEEHIHMVRNSNHLPYGEKL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9596g00001 135 PANTHER OSJNBB0038F03.10 PROTEIN 6 127 IPR044589 -
Mupr9596g00001 135 Pfam GATA zinc finger 6 31 IPR000679 GO:0006355|GO:0043565
Mupr9596g00001 135 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 35 - -
Mupr9596g00001 135 CDD ZnF_GATA 6 31 IPR000679 GO:0006355|GO:0043565
Mupr9596g00001 135 Gene3D - 5 106 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9596g00001 Mupr-Chr9596 8257 9246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9596g00001 6 40 C2C2-Gata Transcription Factor Family AT4G17570 62.857 5.53e-10 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr9596g00001 GATA 3.1e-09 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9596g00001 - - vun:114178599 138.272