Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9595g00001 ATGATGGTTAATTGGGTATGGTTGGTGACAGAACAGATGGAATCGGATCTTGGCAAGCTCTTCATTGGGGGAATTTCCTGGGACACTGACGAGGAACGTCTCAAAGAATATTTTGGGAAATATGGAGAGGTGATAGAGACTGTGATCATGAGAGATCGTGCAACTGGCCGTGCTCGCGGTTTCGGCTTTGTTGTCTTTGCTGATCCTGCTATTGCAGAAAGAGTCATTATGGATAAGCACATAATTGATGGCCGCACAGTTGAAGCTAAGAAAGCTGTTCCTAGGGATGATCAGCACATTGTAAACAGACAGTCTGGTGGCATGCAGGGATCTCCTGGTCCTGGGCGCACCAAAAAGATTTTTGTGGGAGGTTTGCCATCAACAATCACAGAAAGTGATTTTAAGAAGTACTTTGATCAGTTTGGTACAATTACTGATGTTGTAGTAATGTATGATCACAATACCCAGAGGCCAAGAGGTTTTGGCTTCATCACTTATGATTCAGAAGAAGCTGTGGACAGAGTTCTTTATAAAACGTTTCATGAACTCAATGGGAAAATGGTTGAGGTCAAGAGGGCAGTTCCTAAAGAGCTTTCCCCCGGACCTAGCCGGAGTCCATTGATAGGATTTAACTTTGGTTTTAATAGGAGCAGTAGCTTCCTAAATAGTTATGCTCAGGGTTTCAACATGAACCCAGCTGGAGGTTTTGGAGTCAGGATGGATGGAAGGTTTAGTCCACTTACTAGTGCTAGAAATGGATTTGCCCCATTTGGCTCCAGTGGTTATGGAATGGGAGTGAATTTGGATTCAGGATTGAATCCAAGCTATGGAGGGAATTCCAGTTACACTGGTGGCAGTCTAGCTTATGGCCGGATTAGTCCTTTCTACAATGGCAACTCAAGCAGATATACCACTCCTATTGGCAATAATGGGGGCAATGCGAGAAGCGATTCTCTTATGAACTCAGCTTCTCGAAGTGTTTGGGGAAATGATGCCCTGAACAATGCCGCCAATAATCAAGTCAACCCTGGTGCTTACTTGGGATCTGGAAGTGGAGCTTTCGGTGTTTCAATTGGAAATAGTGGTACAAATTGGGGTCCATCAGTTCCAAGCCAGGGTGGAGGGGTTGCTTCTGGGTATAGTACTTGGGGTAACACTTATGAAGGTGGAGATAACAGCATTGGTTTAGTAGGTGGAGGGTATGGAAGGAACAGCAGCCCAGGTGTGCCTCAATCCTCAGCATTTACTGCACCAACTGCTGGTTATGAAGGATCCTATGGGGACTTGTACCGCAGTGGTTCAGTTTACAGTGACTCAACTTGGCGATCTGCTGCTTCTGAGATAGATGCTTCTGGTTCCTTTGGTTATGGACTTGCTGGCATAGGTTCAGATGACCCCGTAAAGAATTCTGAGGGTTTTATTGGTAACTACAATGTAACAAGTAGACAATCTAATAGAGTAGATGAAGGGAAACTGGATAAAGAAAATGAGGCCATGGCAAGCCCTGTGTTGGAGATTTTAGAGGATTGTCACATGCAAATCCATACAAATGCACATGCCTCAGTTATGTTGAAGCGTGTGGCAATGACAACAACATGGATAGCAATGTTGGGTTTTAGAAATCTTTGGAAGTTTGAATTGGAAAACAAATCCATTGACAAGGATGTTGAGGATATTTAA 1680 0.4405 MMVNWVWLVTEQMESDLGKLFIGGISWDTDEERLKEYFGKYGEVIETVIMRDRATGRARGFGFVVFADPAIAERVIMDKHIIDGRTVEAKKAVPRDDQHIVNRQSGGMQGSPGPGRTKKIFVGGLPSTITESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKELSPGPSRSPLIGFNFGFNRSSSFLNSYAQGFNMNPAGGFGVRMDGRFSPLTSARNGFAPFGSSGYGMGVNLDSGLNPSYGGNSSYTGGSLAYGRISPFYNGNSSRYTTPIGNNGGNARSDSLMNSASRSVWGNDALNNAANNQVNPGAYLGSGSGAFGVSIGNSGTNWGPSVPSQGGGVASGYSTWGNTYEGGDNSIGLVGGGYGRNSSPGVPQSSAFTAPTAGYEGSYGDLYRSGSVYSDSTWRSAASEIDASGSFGYGLAGIGSDDPVKNSEGFIGNYNVTSRQSNRVDEGKLDKENEAMASPVLEILEDCHMQIHTNAHASVMLKRVAMTTTWIAMLGFRNLWKFELENKSIDKDVEDI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9595g00001 559 CDD RRM1_hnRNPA_hnRNPD_like 20 90 - -
Mupr9595g00001 559 Gene3D - 117 197 IPR012677 -
Mupr9595g00001 559 SUPERFAMILY RNA-binding domain, RBD 117 205 IPR035979 GO:0003676
Mupr9595g00001 559 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 94 IPR000504 GO:0003723
Mupr9595g00001 559 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 87 IPR000504 GO:0003723
Mupr9595g00001 559 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 120 178 IPR000504 GO:0003723
Mupr9595g00001 559 PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 13 486 - -
Mupr9595g00001 559 SMART rrm1_1 119 191 IPR000504 GO:0003723
Mupr9595g00001 559 SMART rrm1_1 19 90 IPR000504 GO:0003723
Mupr9595g00001 559 CDD RRM2_Hrp1p 119 196 - -
Mupr9595g00001 559 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 118 195 IPR000504 GO:0003723
Mupr9595g00001 559 FunFam Heterogeneous nuclear ribonucleoprotein 1 17 99 - -
Mupr9595g00001 559 Gene3D - 18 100 IPR012677 -
Mupr9595g00001 559 SUPERFAMILY RNA-binding domain, RBD 10 116 IPR035979 GO:0003676
Mupr9595g00001 559 FunFam Heterogeneous nuclear ribonucleoprotein 1 115 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9595g00001 Mupr-Chr9595 4191 8484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9595g00001 17 192 Eukaryotic Initiation Factors Gene Family AT2G23350 24.157 2.04e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9595g00001 K14411 - gmx:100788515 830.476