Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9592g00002 ATGAAGAAAAACAAAGTCACCGCCACGCCGCCGCTGCGACGCGAACAGAGAAACCCGAAGCCAGATTTCAAGATGAAGTTCAACATTGCGAATCCCACCACCGGTTGTCAAAAGAAGCTGGAGATCGATGACGACCTGAAGCTACGAGCATTTTGGGACAAAAGGATCTCACAGGAGGTTGTTGGTGATGCTTTGGGTGAGGAATTCAAAGGCTATGTCTTCAAAATTACTGGAGGTTGTGACAAACAAGGATTTCCCATGAAGCAAGGAGTGTTGACCCCTGGTCGTGTTCGCCTCTTGCTGCACAGAGGAACTCCTTGCTTCCGTGGTTATGGAAGGCGTAATGGAGAACGCAGGAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTCTGAACTTAGTGATTGTAAAGAAGGGTGAAGATGATTTACCTGGTCTCACAGATGTTGAAAAGCCAAGGATGAGGGGTCCGAAGAGAGCATCCAAAATTCGCAAGCTGTTCAATCTGTCTAAGGAGGATGATGTGAGGAAGTATGTCAACACATATCGTAGAACATTTACAACTAAAGCTGGGAAAAAGGTCAGCAAAGCTCCAAAGATACAACGACTGGTCACTCCCTTAACCCTCCAAAGAAAGAGGGCAAGAATTGCTGATAAAAAGAAGAGAATTGCCAAGGCAAAATCTGAGGCAGCAGAGTACCAGAAACTTCTTGCCTCTAGATTGAAGGCGCAGAGGGAACGCCGGAGCGAGAGCTTGGCTAAGAGAAGATCAAAGCTTTCCAGTGCTACTAAACAAGCCACCACAGCATAA 822 0.472 MKKNKVTATPPLRREQRNPKPDFKMKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVVGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEDDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKAQRERRSESLAKRRSKLSSATKQATTA 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9592g00002 273 Pfam Ribosomal protein S6e 25 152 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mupr9592g00002 273 Coils Coil 213 240 - -
Mupr9592g00002 273 MobiDBLite consensus disorder prediction 1 22 - -
Mupr9592g00002 273 ProSitePatterns Ribosomal protein S6e signature. 76 87 IPR018282 GO:0003735|GO:0005840|GO:0006412
Mupr9592g00002 273 SMART Ribosomal_S6e_2 25 152 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mupr9592g00002 273 MobiDBLite consensus disorder prediction 244 273 - -
Mupr9592g00002 273 Gene3D - 157 258 - -
Mupr9592g00002 273 PANTHER 40S RIBOSOMAL PROTEIN S6 25 264 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mupr9592g00002 273 PIRSF RPS6e 25 273 IPR014401 GO:0003735|GO:0005840|GO:0006412
Mupr9592g00002 273 MobiDBLite consensus disorder prediction 244 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9592g00002 Mupr-Chr9592 15111 17538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9592g00002 25 273 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 70.683 4.79e-117 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9592g00002 K02991 - gmx:100801194 441.81