Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9592g00001 ATGCGATATAGCAGTGGCGCTGTGCGTGCACCCAACCCAAGTCAATCGGTTTCAACCCGAGGGAGTAATGTGGGTCCCAATAGGCAGCCTAGGCGATTGAGCATCGCCATGGCCTCACCTCCTATTGATCGCTGGGATGCTGATAGAATACTTCGATTATATTTGCATGATTATATGATCAAAAGGGGAATGCACAACGCCGCTGAGATTTTCAAGAATGAAGCACAAGTTCCTGATAACCCCGTTGACATGAAATTTTTAGATTCAGTGATTGATTCTCCAGATGGTTTCCTGCATGAATGGTGGTCTATTTTCTACGAGGTATTTACCTCTAGACAAGGGAAGATCCAAGAGACTGGGCCAGGGTCCTCTAGTAAGGTCCCAATGATGACAGATAATGCAAGGAATAATGCCCCTCCTAGAATCCCTCAAATATCAACGAGTGAGCAGAGAACTCCACAATTTCAAGTCAACTCCAGCTTTAACAACATGATGCCACAACAAGCCGTTTGTGTAATACCTTCAACGATGTTCAATAGAGAGCAGCTTGGATATATGCCCGAAAATGTTGAACCAAGTTTTCATGATCTTATAAAAAATAACCTGAAGTTCTTGTCAGGGACTAGTTCAAATCATCCGCCGCAAGATGTAGGCAAGCAGGTCCAGAAGCAAGTCTTTAAGGACAGTGGAATTGGCATGCGTGTGGGCAGGGATATACCTAGGGACCCACCGGTTGTAATGCAAAAAACAGTGCTTCCTTTAGATGGACCTCACGAAACAAAAACCAATGAAGCTCTCAATCTAGTGCCACTAAATGGATGGCCATTAAATAATCAAGTACTAACTTCACTTTTGCAAACACCAAATTGTCCACAGCAGTGTCAAGTATTGAAAACACAAGATCAGGACACGGTCCTTGCTCAAGCAACTGCATGTACTCCAAAAAATCAGACTTTCACTGTTCCTGAAAACACTAGCAAACCCAACATTCTGAAGATTTCCGAGACTGAATCAAGTGATAAGGATAAGCAGATGATAGACCAAATGATTACAACTGTAGAACATCAACACCAGCAGGATCAGCAAATGCAGATGCAGTCCCAGAATGTTGAGAAGAGCAGAAAGAGAAAGACAACAGAAGTCATAAGACCTGGAGAAAGTGCCCAGTACTGTAAGGATGCACCCAACAGAAAACCTGGGTATGAAAATGAAAGTGTGGAGTCCTTCCTGTCTTTAGAAAATGAACATGCTGATCATAAAATTGCACCTTTCAGCGATCTGAAACGAACTTCAGATTCATACAAAAATGAAAATAAAGGTTTTTCATTCGAAGAGGTTGGTTGCCTTCATTCAAGCAAAAGCAAGGTTTTGTCTAGCCATTTTTCATCGGATGGAAAAGTTTTGGCAAGTGCTGGACATGAGAAGAAGGTTTTCATTTGGAACATGGAAACTTTTGATTGTGTGACTACTACAGAAACACATTCACTTCTTGTTACAGATGTTCGGTTTAGACCAGGTTCAACTATCTTTGCAACTTCTTCTTTTGACAGATCCGTTAGACTATGGGATGCAGCCAGACCAACCAGATCGCTGTTAAAACTAATTGGGCACGCCGAACAAGTAATGTCATTGGATTTCCACCCAAGAAAAGTGGACCTTCTTTGCTCATGCGATAGCAATGATGTAATTCGACTGTGGAATATCAATCAACGTGTTTGCACACATATCACTAAGGGAGGTAGTAAACAGGTCAGATTCCAGCCTTGTTTTGGGAAGTTTTTGGCTACTGCTACAGGAAATAATATCAAAATAGTTGATGTTGAGACTGATAGCCTTCTATACAATCTAGAGGTAACCGTCGAGGGACATGTTAAAGATGTTCTCTCCATTTGCTGGGATAAATGTGGAAACTCAATTGCCTCCGTCAGTGAAGATAGTGCACGTGTCTGGTCATCAGACGGAAAATGCATAAGTGAATTGCATTCAAACGGGAACAAATTTCAATCATGCATATTTCATCCAGGATATCTTAACCTCTTAATTATTGGTGGTTATCAGTCCCTGGAATTGTGGAGTCCCACTGAGAGTAGTAAAACATGGGCTGTTCCAGCTCACAAGGGATTAATTGCTGGACTAGCAGATTCTCCCGAAGACGAATTGGTTGCCTCAGCTAGCCATGATCATTGTGTGAAACTATGGAAATGA 2205 0.4195 MRYSSGAVRAPNPSQSVSTRGSNVGPNRQPRRLSIAMASPPIDRWDADRILRLYLHDYMIKRGMHNAAEIFKNEAQVPDNPVDMKFLDSVIDSPDGFLHEWWSIFYEVFTSRQGKIQETGPGSSSKVPMMTDNARNNAPPRIPQISTSEQRTPQFQVNSSFNNMMPQQAVCVIPSTMFNREQLGYMPENVEPSFHDLIKNNLKFLSGTSSNHPPQDVGKQVQKQVFKDSGIGMRVGRDIPRDPPVVMQKTVLPLDGPHETKTNEALNLVPLNGWPLNNQVLTSLLQTPNCPQQCQVLKTQDQDTVLAQATACTPKNQTFTVPENTSKPNILKISETESSDKDKQMIDQMITTVEHQHQQDQQMQMQSQNVEKSRKRKTTEVIRPGESAQYCKDAPNRKPGYENESVESFLSLENEHADHKIAPFSDLKRTSDSYKNENKGFSFEEVGCLHSSKSKVLSSHFSSDGKVLASAGHEKKVFIWNMETFDCVTTTETHSLLVTDVRFRPGSTIFATSSFDRSVRLWDAARPTRSLLKLIGHAEQVMSLDFHPRKVDLLCSCDSNDVIRLWNINQRVCTHITKGGSKQVRFQPCFGKFLATATGNNIKIVDVETDSLLYNLEVTVEGHVKDVLSICWDKCGNSIASVSEDSARVWSSDGKCISELHSNGNKFQSCIFHPGYLNLLIIGGYQSLELWSPTESSKTWAVPAHKGLIAGLADSPEDELVASASHDHCVKLWK 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9592g00001 734 ProSitePatterns Trp-Asp (WD) repeats signature. 554 568 IPR019775 -
Mupr9592g00001 734 ProSiteProfiles LIS1 homology (LisH) motif profile. 47 79 IPR006594 GO:0005515
Mupr9592g00001 734 Gene3D - 426 580 IPR015943 GO:0005515
Mupr9592g00001 734 Gene3D - 581 734 IPR015943 GO:0005515
Mupr9592g00001 734 ProSiteProfiles Trp-Asp (WD) repeats profile. 702 734 IPR001680 GO:0005515
Mupr9592g00001 734 ProSiteProfiles Trp-Asp (WD) repeats profile. 534 576 IPR001680 GO:0005515
Mupr9592g00001 734 ProSiteProfiles Trp-Asp (WD) repeats profile. 449 490 IPR001680 GO:0005515
Mupr9592g00001 734 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 491 523 - -
Mupr9592g00001 734 Pfam WD domain, G-beta repeat 486 523 IPR001680 GO:0005515
Mupr9592g00001 734 Pfam WD domain, G-beta repeat 702 734 IPR001680 GO:0005515
Mupr9592g00001 734 Pfam WD domain, G-beta repeat 619 651 IPR001680 GO:0005515
Mupr9592g00001 734 MobiDBLite consensus disorder prediction 1 34 - -
Mupr9592g00001 734 SUPERFAMILY WD40 repeat-like 443 734 IPR036322 GO:0005515
Mupr9592g00001 734 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 37 734 IPR044716 GO:0003714
Mupr9592g00001 734 MobiDBLite consensus disorder prediction 364 383 - -
Mupr9592g00001 734 CDD WD40 445 734 - -
Mupr9592g00001 734 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 702 734 - -
Mupr9592g00001 734 ProSiteProfiles Trp-Asp (WD) repeats profile. 491 523 IPR001680 GO:0005515
Mupr9592g00001 734 MobiDBLite consensus disorder prediction 8 29 - -
Mupr9592g00001 734 SMART WD40_4 570 606 IPR001680 GO:0005515
Mupr9592g00001 734 SMART WD40_4 484 523 IPR001680 GO:0005515
Mupr9592g00001 734 SMART WD40_4 693 734 IPR001680 GO:0005515
Mupr9592g00001 734 SMART WD40_4 527 567 IPR001680 GO:0005515
Mupr9592g00001 734 SMART WD40_4 613 651 IPR001680 GO:0005515
Mupr9592g00001 734 SMART WD40_4 653 692 IPR001680 GO:0005515
Mupr9592g00001 734 SMART WD40_4 442 481 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9592g00001 Mupr-Chr9592 3604 11871 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9592g00001 494 733 Miscellaneous Gene Families AT5G08390 24.696 6.40e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Mupr9592g00001 WD40 0.0079 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9592g00001 - - gsj:114387334 1159.44