Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9584g00001 ATGCTTATTCCCTCGCGAAATCAAATCGGGTTTCTAGGAATCGAATCTCAGATCTCGGAGATCAGAATGGTGGATCCAAGCGGAAAAGTGAGTGTTGGCGTAGGATCGGAAGCAGCGGAGGACTCTAACCCTAACGCTCCTTCGTCCGGAAGCGAGCAGAAGAAAACCTGCGCCGATTGCGGCACTACCAAGACCCCTCTCTGGAGGGGTGGTCCTGCAGGACCCAAGTCTCTCTGTAACGCCTGCGGGATCAGAAGCCGGAAGAAGAAGAGAGCCATTTTGGGGATAAGCAAGGGTAGCACCGACGATGTCAGAAAGGGGAAGAGAAACATCAACAACAACAACTCCAACTCCAACGCCAACGGTGGCCCCGCTTTGAGGAGGGAAGTTTTGTTGCATCGATCGCATTGGAAGAAGCTCGGCGAGGAAGAAAAAGCTGCCGTGTTGTTGATGTCTCTCTCTTATGGATCCGTTTATGCCTGA 483 0.5238 MLIPSRNQIGFLGIESQISEIRMVDPSGKVSVGVGSEAAEDSNPNAPSSGSEQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGISKGSTDDVRKGKRNINNNNSNSNANGGPALRREVLLHRSHWKKLGEEEKAAVLLMSLSYGSVYA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9584g00001 160 ProSiteProfiles GATA-type zinc finger domain profile. 51 87 IPR000679 GO:0006355|GO:0043565
Mupr9584g00001 160 SMART GATA_3 51 102 IPR000679 GO:0006355|GO:0043565
Mupr9584g00001 160 MobiDBLite consensus disorder prediction 99 125 - -
Mupr9584g00001 160 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 52 92 - -
Mupr9584g00001 160 MobiDBLite consensus disorder prediction 41 60 - -
Mupr9584g00001 160 CDD ZnF_GATA 56 109 IPR000679 GO:0006355|GO:0043565
Mupr9584g00001 160 Pfam GATA zinc finger 57 91 IPR000679 GO:0006355|GO:0043565
Mupr9584g00001 160 Gene3D - 52 121 IPR013088 GO:0006355|GO:0008270
Mupr9584g00001 160 MobiDBLite consensus disorder prediction 32 69 - -
Mupr9584g00001 160 ProSitePatterns GATA-type zinc finger domain. 57 82 IPR000679 GO:0006355|GO:0043565
Mupr9584g00001 160 PANTHER OS01G0976800 PROTEIN 38 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9584g00001 Mupr-Chr9584 3752 4377 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9584g00001 23 160 C2C2-Gata Transcription Factor Family AT5G49300 50.667 2.85e-36 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr9584g00001 GATA 7.7e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9584g00001 - - pvu:PHAVU_003G110400g 219.164