Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9572g00001 ATGAAGAGGCAAAACATCTTAACAGTATTGGTCTCGTCGTGTTTTATATTTATTTCTCTTATCAATGTTGTTATGGAACTGCGTAAGCTCTGTTGTCATCCTTACATGTTAGAAGGAGTTGAACCAGATATTGATGATGCAAAAGAATCATTCAAACAGCTGCTGGAATCATCGGGGAAGTTGCAATTGCTGGACAAGATGATGGTGAAGCTTAAAGATCAAGGACATAGAGTCCTTATATATTCCCAATTTCAGCACATGCTGGACTTGCTTGAAGATTACTGTACGTACAAGAATTGGCAGTATGAAAGGATTGATGGCAAGGTTGGTGGAGCTGAAAGACAAGTTCGGATAGATCGATTCAATGCCAAAAATTCTTCAAGATTTTGCTTTCTTCTTTCTACTAGAGCTGGGGGACTGGGGATAAACCTTGCAACTGCTGACACAGTTATTATATATGATAGTGATTGGAATCCTCATGCTGATTTACAAGCTATGGCTAGAGCTCACCGCCTTGGACAAACTAACAAGGTGTTAATTTATAGGCTTATAACACGGGGAACTATAGAAGAAAGGATGATGCAGATGACTAAGAAGAAAATGGTGTTAGAACACCTAGTTGTAGGGAGGCTAAAGGCTCAAAATATCAACCAG 654 0.393 MKRQNILTVLVSSCFIFISLINVVMELRKLCCHPYMLEGVEPDIDDAKESFKQLLESSGKLQLLDKMMVKLKDQGHRVLIYSQFQHMLDLLEDYCTYKNWQYERIDGKVGGAERQVRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9572g00001 218 SMART helicmild6 89 173 IPR001650 -
Mupr9572g00001 218 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 19 212 - -
Mupr9572g00001 218 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 63 218 IPR001650 -
Mupr9572g00001 218 Pfam Helicase conserved C-terminal domain 60 173 IPR001650 -
Mupr9572g00001 218 Gene3D - 13 218 IPR027417 -
Mupr9572g00001 218 CDD SF2_C_SNF 58 184 - -
Mupr9572g00001 218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 209 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9572g00001 Mupr-Chr9572 932 3467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9572g00001 52 218 RAD5 or RAD16-like Gene Family AT5G22750 34.320 2.40e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9572g00001 K11643 - gmx:100790230 402.519