Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9547g00002 ATGGAGGATCCAGATGGGACATTAGCAAGTGTTGCCCAATGCATTGAGAAGCTGCGTCAAAGCTCATCTTCTATGCAAGAGAAAGAGTATTCTTTGAAGCAGTTATTGGAGCTTATTGATATGCGAGAAAATGCTTTCAGTGCTGTTGGATCTCATTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCAGGGTCATTGAATGTGAAGATACAGGCAGCAACTGTCTTGGGCTCACTATGTAAAGAAAATGAGCTGAGGGTGAAAGTCTTGCTTGGAGGATGCATTCCTCCTTTGCTTGGTCTACTCAAGTCTAGTTCTGCTGAAGGTCAAGTAGCTGCTGCAAAGACTATTTTTGCTGTCTCTCAAGGTGGTGCCAAAGATCATGTAGGATCAAAAATTTTTTCAACTGAAGGAGTTGTTCCAGTGCTATGGGAGCAGCTGCAAAAGGGCCTGAAGACTGGAAATGTAGTTGATAATTTATTGACTGGGGCATTGAAAAATCTCTCCAGCAGCACTGAGAGATTCTGGAATGCCACAGTACAGGCTGGAGGAGTGGACATATTAATTAAGTTACTGACAACTGGGCAGTCCAGCACTTTGGCAAATGTGTGCTTTTTACTTGCTTGTATGATGATGGAGGATGCATCTGTTTGTTCAAAGGTGTTGACAGCAGAGGCAACAAAACAACTCCTCAAACTTTTAGGCACTGGTAATGATGCCCCTGTCAGGGCTGAAGCAGCCAGTGCTCTTAAATCTCTATCTGCCCAGTGCAAAGATGCAAGGAAAGAGATAGCCAATTCCAATGGCATTCCTGCTTTAATAAATGCTACCATAGCTCCTTCCAAAGAGTTCATGCAGGGTGAGTATGCTCAAGCATTACAGGAGAATGCTATGTGTGCTTTAGCAAACATCTCTGGTGGTTTGTCATATGTCATCTCCAGTCTTGGTCAAAGCCTTGAATCATGCTCCTCACCTACCCAAGCTGCTGACACATTGGGGGCTTTAGCTTCAGCTCTTATGATATATGACGACAAGGCGGAATCTACCAGGGCATCAGATCCTTTGGTAGTTGAGCAGACATTACTTGAACAATTTAAACCACGCACGCCATTCCTTGTGCAAGAACGGACAATTGAAGCCCTAGCTAGTTTGTATAGCAATTCTATACTGTCAATTAAACTTGCAAATTCTGATGCAAAGCGTTTGCTTGTTGGTTTAATAACAATGGCTGCCAATGAAGTGCAAGATGAGCTTCTGAAATCTCTCTTGACATTGTGCAATACTGAATGCAGTTTATGGCGTGCACTTCAAGGCCGTGAAGGAGTTCAGCTGTTGATATCTCTTCTGGGGCTTTCATCAGAACAGCAGCAAGAATGTGCTGTTGCCCTCCTTTGCCTTCTATCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGTGGTATACCTCCTCTTGTTCAAATTTTGGAGTCAGGATCTGCAAAAGCAAAGGAAGACTCAGCAACAATCCTTAGGAACTTGTGCGATCACAGTGAGGATATACGTGCTTGTGTTGAAAGTGCTGATGCCGTTCCTGCATTGCTGTGGCTGTTGAAAAATGGAAGCCCGAATGGGAAGGAGATTGCAGCTAAGACCTTGAATCACTTAATTCATAAATCTGATACAGCAACTATCAGTCAGCTTACCGCATTATTGACCAGTGATTTACCGGAATCTAAGGTTTTTGTTTTAGATGCTTTGAGAAGTATGCTTTCAGTTGTTACTCTTACTGATCTTCTACGTGAAGGTAGTGCTGCCAGTGATGCAATTGATACAATGATAAAATTATTGAGCTCAACAAAGGAAGAAACTCGGGCAAAGTCTGCATCTGCTCTGGCGGGAATTTTTGAAACGAGGAAAGATGTGCGTGAAAGCAGCATTGCTGTCAAAACTCTCTGGTCAGCAATGAAGTTGCTTAATGTTGAATCTGAAAGTATCTTAATGGAGTCCTCACGCTGCTTGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTGGCTGCTATTGCTAGAGATGCATTACCCTCCCTAGTTGCACTAGCTAACTCTTCAGTTTTGGAAGTGGCAGAGCTGGCAACATGTGCTGTGGCAAATCTTATTTTGGATAGTGAAATTGCTGAGAAAGCTGTTGCAGAAGAAGTCATCATGGCTGCTACCAGAGTATTACGAGAAGGCACAATTTCTGGAAAAACACATGCTGCTGCTGCAATTGCTTGCCTCTTACATTCTAAGAGGCAAGTTGATTATACAGTAACTGATTGTGTGAATCGTGCTGGTACTATTCTAGCATTAGTTTCTTTCTTAGACTTTGCTATCAATGAACCTAGTTCCACATCAGAAGCTCTAGAAGCACTTGCCGTGCTGTCCAGGTCAGAAGAGGCAGGTGTACACAGTAAACCTGCTTGGGCAGTTTTGGCTGAATTTCCTAAAAGCATAAGCCCAATAGTTCTTTCTATTGCTGATTCAACACCAGTGTTGCAGGATAAAGCTATTGAAATATTGTCTCGATTATGTAAGGATCAGCCTTTTGTTCTGGGAGACACTGTTGTTACTGCCTCTGGATGTATATCTTCTATAGCTAAGAGGATAATCAATTCCACTTCTAAAAATGTAAAGGTCAAATTTGGAGGAGCTGCTGTTCTTATTTGTGCTGCTAAAGTAAATCATCAGAGGCTGGTGGAGGATCTCAATTCATCTAACTTGTGTGCTAATCTTGTTCAGTCTCTTGTTGATATGCTTATTTCTTCACAGGCTGCTTTGGATATTCAGGGTGATAACAGCAGGGAAGTTATCAGCATTTGCAGGCATACAAAAGAAGCCAACGATGGTAAATCAAACACTGGCACCGCTATTATTTCCGGTGCCAACTTAGCTATATGGTTACTGTCTGTTCTTGCTTGCCATGATGAAAAAAGTAAAATTGCAATAATGGAGGCTGGAGCTATTGAGGTTCTGACTGACAGGATTGCAAATTGTTTCTCACAATATAGTCAGATTGACTATAAAGAAGATAGCAGCATGTGGATTTGTGCTTTGTTGTTGGCAATATTATTTCAAGATAGGGATATCATACGAGCACATGCAACCATGAAATCTATACCAGCCCTTGCCAATTTATTGAAGTCAGAGGAATCAGCCAACAGATATTTTGCTGCGCAATCAATAGCTAGCCTAGTCTGTAATGGTAGCAGGGGAACCCTTCTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATTTCCTTGCTTGGCTGTGCTGATACTGATATACAGGATCTTCTGGAATTGTCAGAGGAATTTTCTTTGGTGCATTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTTAGAGTTGATGACATAAGAGTTGGTGCCACTTCTCGGAAGGCAATACCTGCTCTAGTTGATCTGCTCAAACCAATTCCAGAACGCCCCGGAGCACCATTTTTAGCACTTGGGCTTTTGACTCAGCTTGCTATAGATTGCCCATCAAATAAGATTGTTATGGTTGAGGCAGGGGCCCTAGAGGCACTTTCTAAGTATCTTTCATTAGGTCCACAAGATGCAACGGAAGAAGCAGCTACAGATCTGTTAGGAATTCTGTTTAGCAGTGCAGAAATACGAAGACATGAGTCAGCATTTGGAGCTGTTACTCAACTTGTAGCTGTCCTGCGTTTAGGTGGAAGAGCTGCAAGGTATAGGGCTGCAAAAGCTTTGGAAAGTTTATTCTCTGCTGACCATATTAGAAATGCAGAGACTGCTCGACAAGCTGTTCAACCCTTGGTGGAGATTCTTAATACTGGTTTAGAGAGAGAGCAGCATGCTGCAATTGCTGCATTAGTTAGGCTACTGAGTGAAAACCCTTCAAGAGCACTTGCTGTTGCAGATGTTGAGATGAATGCAGTGGATGTTCTTTGCAGGATTCTTTCGTCAGACTGTTCAATGGACCTCAAAGGGGATGCTGCTGAATTGTGTTCTGTTCTTTTTGGAAATACAAGGATTCGGTCCACAATGGCTGCTGCACGTTGTGTTGAACCTCTGGTCACTCTCCTTGTAAGTGAGTTTAGTCCTGCTCACCATTCTGTTGTCCGGGCATTGGATAGGCTTGTTGATGATGAACAACTGGCTGAATTAGTTGCTGCACATGGTGCAGTTATTCCTCTTGTTGGCCTACTGTATGGTAGGAATTATGTACTTCATGAGGCCATTTCCAGAGCTCTGGTCAAGTTAGGAAAAGACAGGCCAGCTTGTAAAATGGAAATGGTAAAAGCTGGAGTTGTTGAAAGCATACTTGACATTCTTCATGAAGCGCCTGATTATTTATGTGCAGCTTTTGCAGAATTGTTGCGTATATTGACCAATAATGCTAGCATAGCTAAAGGACCATCAGCTGCTAAAGTAGTTGAACCCCTGTTTATGTTGCTGACAAGACAAGAATTTGGGCCAGATGGACAGCATAGTGCATTGCAGGTTTTGGTTAATATCTTAGAACATCCGCAGTGTCGTGCTGATTACACATTGACTTCTCACCAAGCTATTGAACCTCTTATCCCTTTGCTTGATTCTCCAATATCAACAGTGCAACAGTTGGCTGCCGAGCTTCTCTCACATCTACTTTTAGAAGAACACCTTCAGAAAGATCCAGTGACGCAACAGCAGAGAGCTGTAAAGGCCCTGGTCAGTATTGCACTGATATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTTATTGAAATTTCAAAAGTTATATTGCAAGCCGATCCTTCCATTCCTCATGCTTTATGGGAGTCTGCTGCCTCTGTTTTGGCAAGTATTCTGCAATTTAGTTCTGAATACTACTTGGAAGTGCCAGTTGCTGTATTGGTAAGGCTGCTTCGATCTGGCTTAGAAAGCACAGTTATTGGGGCACTAAATGCTCTTCTTGTGTTGGAAAGTGATGATGGAACTAGTGCTGAAGCAATGGCTGAAAGTGGTGCTATAGAGGCTCTCTTGGAGCTCCTAAGATCTCATCAGTGTGAGGAAACTGCTGCAAGACTCTTGGAAGTATTGCTGAACAATGTAAAGATCAGAGAAACCAAAGTTACCAAGTCAGCCATCTTACCATTATCTCATTATCTCTTGGACCCACAAACCCAAGCACAACAAGCAAGGTTATTGGCAACTTTGGCTCTTGGTGATCTATTCCAGAATGAGGGTCTTGCTCGGACAAGTGATGCAGTTTCAGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACCAACTGAAGAAATGAAAGTTGTAGCCATATGTGCTCTGCAAAACCTCGTGATGTATAGTCGATCAAATAAAAGAGCAGTTGCAGAGGCCAGTGGGGTTCAGGTCATACTGGATCTGATAGGTTCAAGTGATCCTGAAACATCTGTTCAGGCTGCAATGTTTATTAAACTTCTATTTTCAAATCATACTATTCAAGAGTATGCTTCAAGTGAAACAGTCAGAGCAATAACTGCTGCTATTGAAAAGGACTTATGGGCTACTGGAACTGTGAACGATGAGTATCTTAAAGCCTTAAATTCTCTATTTAGCAACTTCCCAAGACTGAGAGCAACCGAACCGGCAACACTTAGCATTCCCCATCTGGTTACATCCTTAAAGACAGGCTCCGAAGCTACTCAGGAAGCTGCCTTGGATGCACTTTTCCTACTTAGGCAAGCTTGGTCAGCATGCCCAGCAGAGGTTTCAAGAGCTCAGTCCATTGCAGCTGCAGATGCTATTCCTTTGCTGCAGTACTTAATCCAGTCTGGCCCACCTGGCTTTCAGGAGAAGGCAGAATTTTTATTGCAGTGTTTGCCAGGAACATTGGTGGTGATCATCAAGCGAGGTAACAATATGAAGCAGTCTGTTGGAAACCCAAGTGTTTATTGCAAGCTTACACTTGGAAACACTCCTCCAAGGCAAACCAAGGTGGTCTCAACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCATGGGCCTTTGAGAGTCCTCCAAAAGGCCAGAAGCTTCACATTTCTTGCAAAAACAAGAGCAAAATGGGGAAGAGTTCATTTGGGAAAGTGACAATCCAGATTGATCGGGTAGTAATGCTAGGAGTCGTATCTGGAGAGTACACTCTGTTGCCGGAAAGTAAAAGTGGCCCCTCGAGGAATTTAGAAATAGAATTTCAGTGGTCAAACAAGTGA 6255 0.4304 MEDPDGTLASVAQCIEKLRQSSSSMQEKEYSLKQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIFAVSQGGAKDHVGSKIFSTEGVVPVLWEQLQKGLKTGNVVDNLLTGALKNLSSSTERFWNATVQAGGVDILIKLLTTGQSSTLANVCFLLACMMMEDASVCSKVLTAEATKQLLKLLGTGNDAPVRAEAASALKSLSAQCKDARKEIANSNGIPALINATIAPSKEFMQGEYAQALQENAMCALANISGGLSYVISSLGQSLESCSSPTQAADTLGALASALMIYDDKAESTRASDPLVVEQTLLEQFKPRTPFLVQERTIEALASLYSNSILSIKLANSDAKRLLVGLITMAANEVQDELLKSLLTLCNTECSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILESGSAKAKEDSATILRNLCDHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVFVLDALRSMLSVVTLTDLLREGSAASDAIDTMIKLLSSTKEETRAKSASALAGIFETRKDVRESSIAVKTLWSAMKLLNVESESILMESSRCLAAIFLSIKENRDVAAIARDALPSLVALANSSVLEVAELATCAVANLILDSEIAEKAVAEEVIMAATRVLREGTISGKTHAAAAIACLLHSKRQVDYTVTDCVNRAGTILALVSFLDFAINEPSSTSEALEALAVLSRSEEAGVHSKPAWAVLAEFPKSISPIVLSIADSTPVLQDKAIEILSRLCKDQPFVLGDTVVTASGCISSIAKRIINSTSKNVKVKFGGAAVLICAAKVNHQRLVEDLNSSNLCANLVQSLVDMLISSQAALDIQGDNSREVISICRHTKEANDGKSNTGTAIISGANLAIWLLSVLACHDEKSKIAIMEAGAIEVLTDRIANCFSQYSQIDYKEDSSMWICALLLAILFQDRDIIRAHATMKSIPALANLLKSEESANRYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVHYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPERPGAPFLALGLLTQLAIDCPSNKIVMVEAGALEALSKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFGAVTQLVAVLRLGGRAARYRAAKALESLFSADHIRNAETARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSDCSMDLKGDAAELCSVLFGNTRIRSTMAAARCVEPLVTLLVSEFSPAHHSVVRALDRLVDDEQLAELVAAHGAVIPLVGLLYGRNYVLHEAISRALVKLGKDRPACKMEMVKAGVVESILDILHEAPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFMLLTRQEFGPDGQHSALQVLVNILEHPQCRADYTLTSHQAIEPLIPLLDSPISTVQQLAAELLSHLLLEEHLQKDPVTQQQRAVKALVSIALIWPNEIAKEGGVIEISKVILQADPSIPHALWESAASVLASILQFSSEYYLEVPVAVLVRLLRSGLESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAILPLSHYLLDPQTQAQQARLLATLALGDLFQNEGLARTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNKRAVAEASGVQVILDLIGSSDPETSVQAAMFIKLLFSNHTIQEYASSETVRAITAAIEKDLWATGTVNDEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPGFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTKVVSTGPNPEWDESFSWAFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGVVSGEYTLLPESKSGPSRNLEIEFQWSNK 2084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9547g00002 2084 Pfam Armadillo/beta-catenin-like repeat 473 513 IPR000225 GO:0005515
Mupr9547g00002 2084 Pfam Armadillo/beta-catenin-like repeat 52 82 IPR000225 GO:0005515
Mupr9547g00002 2084 SUPERFAMILY ARM repeat 11 1563 IPR016024 -
Mupr9547g00002 2084 Gene3D - 1586 1962 IPR011989 -
Mupr9547g00002 2084 Gene3D - 826 1316 IPR011989 -
Mupr9547g00002 2084 CDD C2 1965 2055 - -
Mupr9547g00002 2084 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1146 1190 IPR000225 GO:0005515
Mupr9547g00002 2084 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 484 526 IPR000225 GO:0005515
Mupr9547g00002 2084 Gene3D - 1317 1585 IPR011989 -
Mupr9547g00002 2084 Gene3D - 5 361 IPR011989 -
Mupr9547g00002 2084 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1963 2084 - -
Mupr9547g00002 2084 SUPERFAMILY ARM repeat 18 324 IPR016024 -
Mupr9547g00002 2084 Gene3D - 403 598 IPR011989 -
Mupr9547g00002 2084 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1330 1564 - -
Mupr9547g00002 2084 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1962 2081 IPR035892 -
Mupr9547g00002 2084 ProSiteProfiles C2 domain profile. 1944 2061 IPR000008 -
Mupr9547g00002 2084 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 2084 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Mupr9547g00002 2084 SMART C2_3c 1964 2060 IPR000008 -
Mupr9547g00002 2084 Gene3D - 599 825 IPR011989 -
Mupr9547g00002 2084 Gene3D C2 domain 1963 2084 IPR035892 -
Mupr9547g00002 2084 SMART arm_5 1516 1557 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 1134 1177 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 515 555 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 1348 1388 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 1179 1220 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 216 257 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 1431 1471 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 1790 1830 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 681 719 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 259 308 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 1389 1429 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 1663 1702 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 84 124 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 766 808 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 1261 1302 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 473 513 IPR000225 GO:0005515
Mupr9547g00002 2084 SMART arm_5 42 83 IPR000225 GO:0005515
Mupr9547g00002 2084 SUPERFAMILY ARM repeat 1559 1961 IPR016024 -
Mupr9547g00002 2084 SUPERFAMILY ARM repeat 525 1079 IPR016024 -
Mupr9547g00002 2084 Pfam C2 domain 1963 2061 IPR000008 -
Mupr9547g00002 2084 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9547g00002 Mupr-Chr9547 6693 14880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9547g00002 436 568 U-box Gene Family AT2G23140 40.741 4.35e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9547g00002 - - gmx:100816765 3747.59