Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9542g00004 ATGATACAGAAAGAAGGTTTCACTTTTGAGGCTCAAAGTATTCAGAAAATGGAGCTTCTTATTCTGGGGGCTTTAAATTGGCGTATGAGGTCAATCACACCTTTTTCTTTCTTGCATTTCTTCATCTCTTTAGCTGAAATTAAAGACCAATCACTGAAGCAAGCACTTAAAGAGAGAGCTTCAGAGATAATCTTAAATGCTAAAAATGAGTATAAACCTTCAACTATTGCAGCAACTGCTCTTATCTTTGCATCTCATGAACTATCCCCGGAACAATATTCTATTCTGAGAGCTTCAATTACAGCATGTGAGTATCTACATGAGGAGACATTGTCCAAGTGTTTTAATGTGATGCAAGAGATGGGGAGAATGGAAGCAAAGGAGTTAATGATAGATACAAGCTTTTTAAGCACTGAAACTCCAGTGAGTGTGCTGGAGAGAAACACCAAACGACAAAGATTTTGA 465 0.3742 MIQKEGFTFEAQSIQKMELLILGALNWRMRSITPFSFLHFFISLAEIKDQSLKQALKERASEIILNAKNEYKPSTIAATALIFASHELSPEQYSILRASITACEYLHEETLSKCFNVMQEMGRMEAKELMIDTSFLSTETPVSVLERNTKRQRF 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9542g00004 154 SUPERFAMILY Cyclin-like 13 124 IPR036915 -
Mupr9542g00004 154 Gene3D - 10 133 - -
Mupr9542g00004 154 PANTHER CYCLINS 8 120 IPR039361 -
Mupr9542g00004 154 FunFam D6-type cyclin 24 116 - -
Mupr9542g00004 154 Pfam Cyclin, C-terminal domain 32 122 IPR004367 -
Mupr9542g00004 154 CDD CYCLIN_AtCycD-like_rpt2 32 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9542g00004 Mupr-Chr9542 20287 20942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9542g00004 5 147 Core Cell Cycle Gene Families AT4G03270 43.046 2.69e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9542g00004 K18812 - gmx:100799985 251.136