Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9542g00001 ATGAAGAAGTGCGAGCTCTGTAACAGTCCCGCAAAGTTGTTCTGTGAATCAGATCAAGCCAGCCTCTGTTGGGAATGCGATGCTAAGGTTCACACAGCAAACTTCCTCGTCACCAAACATCCCAGGATTCTTCTCTGCCATGTTTGTCAATCACTAACGGCGTGGCACGGAACCGGACCCAAGTTTGTACCCACCATCTCCGTTTGCAACACTTGTGTTAACAACAATAGTGAGACCTGCAGCCAACATAATCATGACGAAGACGACAATGATGAAGACGATGACGAGGATCACGACCACGATGGTGATCATGTACAAAACGATGATGGTGTTGTGGCCGAAGATGATGAAGAAAATCAAGTGGTTCCGTGGACATCTACACCACCACCCCCAGCTTCCACTTCTTCAAATAGTGTTGCAACTAGTTCTACCAGGTTCTCTAATGTTGAAGAAGTTTTCACAAGTAACAAAGGTCGCAATCGTAGAGCATTCAACTTGCTGTTCTAA 507 0.4596 MKKCELCNSPAKLFCESDQASLCWECDAKVHTANFLVTKHPRILLCHVCQSLTAWHGTGPKFVPTISVCNTCVNNNSETCSQHNHDEDDNDEDDDEDHDHDGDHVQNDDGVVAEDDEENQVVPWTSTPPPPASTSSNSVATSSTRFSNVEEVFTSNKGRNRRAFNLLF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9542g00001 168 CDD Bbox1_BBX-like 3 45 - -
Mupr9542g00001 168 MobiDBLite consensus disorder prediction 80 146 - -
Mupr9542g00001 168 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 147 - -
Mupr9542g00001 168 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Mupr9542g00001 168 SMART bboxneu5 1 45 IPR000315 GO:0008270
Mupr9542g00001 168 MobiDBLite consensus disorder prediction 131 146 - -
Mupr9542g00001 168 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9542g00001 Mupr-Chr9542 3676 4697 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9542g00001 2 110 C2C2-CO-like Transcription Factor Family AT4G27310 48.182 9.01e-33 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr9542g00001 zf-B_box 2.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9542g00001 - - gmx:100805832 238.039