Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr953g00004 ATGCGGGATGCGGGGAGTTTAAATAACAAAGGATCTGGAAAATCCAGTTACTCAAAGGATCAGACGAAGTCCAAGCAAGTTTCCTCAAAATTCAAAACAAGTAGCACAAAACGCCAAGGGAAGAAACACAAAGTGAAGTCAAAATCTCATAAACACAGAGTTGGTACAAACACATCAAAGAAGACAGTTACTGATTCTTCTATCAAGGCATCACTTGACAATTCTTCAAATAAAAAAGTTATTATTAGAAAAAATCTGGATAAAACTGATGGGAAATCTTCACAACAGATGCTGTCTTCAACAAAGCTACAAGGAGGAAAAAATTCTCGTAGTTCTAGAAAAGAGGGGAATGATGTTGATGGGGAGGCAAAGATTCAAAAACGTAAGAGAAGGAGAAAGAAGAAAAGACAAAGGGATAACATGGATCTTGATGATGCTTCACGCCTGCGAAGGAGAACAAGATACCTCTTAATCAAAATGAAGTTGGAGCAGAACCTTATTGATGCTTACTCTGGAGAAGGTTGGAAAGGTCATAGTCGGGAGAAGATTAGGCCAGAAAAGGAGCTGCTAAGAGCAAAGAAGCAGATTTTAAAATGTAAACTTGGTATTCGCGATGCCATACACCAACTGGATTCTCTTAGTTCTGTGGGTAGCATTGAAGATTCTGCCATTGCCCCAGATGGATCTGTTTATCATGAACATATTTTCTGTGCCAATTGCAAACTACATGAAGCTTTCCCAGATAATGATATTATACTCTGTGACGGAACGTGCAATCGTGCTTTTCACCAAAGATGTCTCAATCCTCCTTTGGATACTGAAAATATTCCTCCTGGAGATCAAGGCTGGTTTTGCAAGTTTTGTGAATGTAAGATAGAAATACTAGAGGCAACAAATGCCCATCTTGGGACTCAATTTTCCTTGGACAGTTCTTGGCAGGATGTATTCAAGGAAGAGGCTGCTATGCCTGATGGTGATATTGCATTACTAAATCCAGAAGAAGAATGGCCATCAGATGATCCTGAAGATGATGATTACAATCCAGAGAGGAAAGAAGACAGCCACAGCATCAACCCAGATGGAGATGATGAAAATGCATCCAATGATTTAAGCAGTTCTTCCAGTCTGTGGTCTTTGAATGGCGAAAGTTCTCCAGTAAATGAAGGCATCAGCCATGAATATTATTCTGTTAATAGCTGCATAGATTCTGATGAGTCTGGGGAAATAACATGTGGACGTAGGCAGCGTAAAGCTGTTGACTATAAGAAACTCTATGACGAAATGTTTGGGAAGGATGCTCCACCATGTGAACAAGTGAGTGAAGATGAGGACTGGGGTCCTGGCAAAAGGAAGCGAAGAGAAAAGGAGTCTGATGCTGTCAATACTCTTATGACTCTGCATGAAAGTGAGAACAAATATCCCAATAATGAGAACAATGTCAGAATAAGAGATAGTTCTTCGGGCATACAAATAAAAAGATCTTGTTTCAGGATTCCGCTTGATGCAGTTGAGAAACTTCGCCAAGTTTTTGCAGAGAATGAGCTTCCTCCAAAATCTGTGAAGGACAATCTTTCAGAAGAGTTGGGACTAGATCCTGAAAAGGTTAGCAAATGGTTCAAAAATGCACGTTACTTAGCACTTAAAACCAGAAGGTATCAAGCAGAAGGGGAACAGCTTCAGAGTATCACTTCTAAGATCTCAAAGGATTCTATATCTCAAAACGAGGAGAAAGATGAGCTTTTGAAACCAAAGGTCTCCAAAATTACTGTGATTCATTCCCAGAAGGAGGATGGTAAAATCATCACAGGAAAGGAGAAAAATAAATTATCTAGGAGTCTTTTGAAGAAAAGCAAACCAAAAATATCTCCACCTTTGGCAAAAGAAAGCAGCAACAAGGACTCTATGGAGGTCAGTGATGATGTTAAGTTGAAGAAACTGTTGAAGAAAAGGAAAAGAAGGATAAAGTTTATATTTGAAGGAGACTCTCAGGCAGCAGCAGAGTTGGAATTTGAAAGACTCAGCAAAGTGAAGATTAAACTAGATAGCATGAAGCAAAAGTTAACCGAAGTTCAAAATTGCAGATCAAAAGGTTCAAATAAACTCGATTCGAATGAAACTTCTTCTATTATATATGTACCCACAGCTGAGTTAAGGGAAAAGGCTGAATAA 2169 0.3905 MRDAGSLNNKGSGKSSYSKDQTKSKQVSSKFKTSSTKRQGKKHKVKSKSHKHRVGTNTSKKTVTDSSIKASLDNSSNKKVIIRKNLDKTDGKSSQQMLSSTKLQGGKNSRSSRKEGNDVDGEAKIQKRKRRRKKKRQRDNMDLDDASRLRRRTRYLLIKMKLEQNLIDAYSGEGWKGHSREKIRPEKELLRAKKQILKCKLGIRDAIHQLDSLSSVGSIEDSAIAPDGSVYHEHIFCANCKLHEAFPDNDIILCDGTCNRAFHQRCLNPPLDTENIPPGDQGWFCKFCECKIEILEATNAHLGTQFSLDSSWQDVFKEEAAMPDGDIALLNPEEEWPSDDPEDDDYNPERKEDSHSINPDGDDENASNDLSSSSSLWSLNGESSPVNEGISHEYYSVNSCIDSDESGEITCGRRQRKAVDYKKLYDEMFGKDAPPCEQVSEDEDWGPGKRKRREKESDAVNTLMTLHESENKYPNNENNVRIRDSSSGIQIKRSCFRIPLDAVEKLRQVFAENELPPKSVKDNLSEELGLDPEKVSKWFKNARYLALKTRRYQAEGEQLQSITSKISKDSISQNEEKDELLKPKVSKITVIHSQKEDGKIITGKEKNKLSRSLLKKSKPKISPPLAKESSNKDSMEVSDDVKLKKLLKKRKRRIKFIFEGDSQAAAELEFERLSKVKIKLDSMKQKLTEVQNCRSKGSNKLDSNETSSIIYVPTAELREKAE 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr953g00004 722 CDD homeodomain 492 544 IPR001356 GO:0003677
Mupr953g00004 722 FunFam pathogenesis-related homeodomain protein 491 555 - -
Mupr953g00004 722 ProSitePatterns Zinc finger PHD-type signature. 237 288 IPR019786 -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 59 79 - -
Mupr953g00004 722 Pfam PHD-finger 236 291 IPR019787 -
Mupr953g00004 722 SMART PHD_3 236 289 IPR001965 -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 363 383 - -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 108 125 - -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 612 635 - -
Mupr953g00004 722 CDD PHD_PRHA_like 236 288 IPR045876 -
Mupr953g00004 722 Pfam Homeodomain 502 544 IPR001356 GO:0003677
Mupr953g00004 722 Gene3D - 491 558 - -
Mupr953g00004 722 FunFam pathogenesis-related homeodomain protein-like 228 288 - -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 1 145 - -
Mupr953g00004 722 SUPERFAMILY FYVE/PHD zinc finger 228 293 IPR011011 -
Mupr953g00004 722 ProSiteProfiles Zinc finger PHD-type profile. 234 291 IPR019787 -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 348 362 - -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 35 57 - -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 433 459 - -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 91 107 - -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 333 347 - -
Mupr953g00004 722 SUPERFAMILY Homeodomain-like 493 548 IPR009057 -
Mupr953g00004 722 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 285 IPR013083 -
Mupr953g00004 722 SMART HOX_1 491 553 IPR001356 GO:0003677
Mupr953g00004 722 ProSiteProfiles 'Homeobox' domain profile. 489 549 IPR001356 GO:0003677
Mupr953g00004 722 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 14 720 - -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 8 34 - -
Mupr953g00004 722 MobiDBLite consensus disorder prediction 330 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr953g00004 Mupr-Chr953 31817 37552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr953g00004 136 554 Homeobox Transcription Factor Family AT4G29940 58.178 4.71e-157 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Mupr953g00004 PHD 8.9e-11 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr953g00004 - - gmx:100787118 1146.34