Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9539g00003 ATGGACATATACGAGCCATTTCAGCAAGTTAGTATGTGGGGGGACAACTTTAAAGTTGATGGCGGCCTGAATTCAATTGCTGCTCCAATGTTAATGGTTGACACTAATATGGAGAACAAGCCTGAGTATATTCCTCAGGAATCAAGAGAGCCGTCTGGAGCTGATCAAGATTCCACAAATAAAAATGTTAATAAGATGCTAAGACGCCTAGCTCAGAATCGAGAGGCTGCTCGGAAAAGTCGGCTTCGAAAAAAGGCTTATGTTAAACAATTAGAATCAAGCCGGTTGAAGCTCATGCAATTGGAGCTAGAAATTGGGAAAGCAAGAAAGCAGGGTATGTACATGGGCACTGCATTAGATGCCGGCTATATAGGATCATCATCAGAAACAATAAACCCAGGGATTGTTGCTTTTGAAATTGAATATGGACAATGGGTGGAAGAGCAACAAAGGCGGAACGAAGAACTTAGACAAGCATTTCAAACGCAAGCATCTGATGTACATCAGCTCCATGTACTGGTTCAAAGTGTCTTGAACCATTACTCAAATCTTTTCAGAATGAAAGCAGATGCTGCAAAGGCTGATGTGCTCTATTTAATCTCTGGTGTGTGGAAAGCGTCAGTGGAACGCATTTTCCTTTGGATTGGAGGGCCCCGTCCATCACAGCTTCTAAATATCATAGTGCCACAAGTTGAGCCTTTGAGTGAGCAACAAATTGTTAGCATTAACAACCTCCGCCTATCATCTCAGCAAGCTGAAGATGCTCTTTCACAAGGATTGGAAAAACTTCAGCAGAGTTTGGTCCACGACATGGCAGTTGATCCATTGGGTGTAGCAAACTTGGGATTTCAGATGGCTCTTGCTATGGACAAATTTGAGGCACTAGAAGGTTTTGTAAACCAGGCAGATCACCTTAGGCTACAAACACTGCTGCACATGTCACGCATCCTGACAACTTACCAAGCTGCTCGGGGCTTGCTGGCTCTTGGGGAATACTTTCACCGTCTTCGCACTCTTTGTTCTCTTTGGGCTGCTCACCTCAGACGACACCAATTTCTATCTAGGGTTTCGTTTCGAAACCCTAATTGCAAGCCCCGTTTGCCATCGCCCTTTCTATATTCTACAATCGGTTCTTGGGGTTCGAATCCCTGGTTTCGCGTGAATCAGAGAAGAACTGTGGCCAAGGCATCAAATTGGGCTGAACAAAAATCCCCATATGATACTCTTGAACTGGAAGGAGATGCAGATGACGAGCAGATAAAGAATGCTTATAGACGCTTGGCTAAATTTTATCATCCAGATGTCTATGATGGTAGAGGAACCCTCGAGGAAGGTGAAACAGCAGAAGCTAGATTTATCAAGATTCAAGCTGCTTATGAATTGCTTATAGATGGGGAGAGGCGAAGACAGTATGATATAGATAACCGGGTCAACCCTATGAAGGCATCTCAGGCATGGATGGAGTGGCTTATGAAAAAGCGGAAAGCTTTCGATCAGCGGGGTGATATGGCAGTTGCTGCTTGGGCTGAGCAGCAACAACGCGAGTTAAATATTCGCGTGCGACAACTTTCTCGTTCCAAGATAGATCCAGATGAAGCAAGGAAGATTCTGGCAAGAGAAAAGAAGGCTTCGGCTGAAAATTTTTCCAATACCCTTAAAAGGCACACACTTGTACTGAAGAAAAGAGATTTGATGCGAAGAAAGGCCGAGGAAGAAAAGAAGAAGACTATCAGCCGGCTCTTGGCAGCAGAAGGTCTTGAGCTTGATAATGATTCAGATAGCGATGAGGCACTCTAG 1797 0.4435 MDIYEPFQQVSMWGDNFKVDGGLNSIAAPMLMVDTNMENKPEYIPQESREPSGADQDSTNKNVNKMLRRLAQNREAARKSRLRKKAYVKQLESSRLKLMQLELEIGKARKQGMYMGTALDAGYIGSSSETINPGIVAFEIEYGQWVEEQQRRNEELRQAFQTQASDVHQLHVLVQSVLNHYSNLFRMKADAAKADVLYLISGVWKASVERIFLWIGGPRPSQLLNIIVPQVEPLSEQQIVSINNLRLSSQQAEDALSQGLEKLQQSLVHDMAVDPLGVANLGFQMALAMDKFEALEGFVNQADHLRLQTLLHMSRILTTYQAARGLLALGEYFHRLRTLCSLWAAHLRRHQFLSRVSFRNPNCKPRLPSPFLYSTIGSWGSNPWFRVNQRRTVAKASNWAEQKSPYDTLELEGDADDEQIKNAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDGERRRQYDIDNRVNPMKASQAWMEWLMKKRKAFDQRGDMAVAAWAEQQQRELNIRVRQLSRSKIDPDEARKILAREKKASAENFSNTLKRHTLVLKKRDLMRRKAEEEKKKTISRLLAAEGLELDNDSDSDEAL 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9539g00003 598 SUPERFAMILY Chaperone J-domain 349 471 IPR036869 -
Mupr9539g00003 598 SMART brlzneu 61 121 IPR004827 GO:0003700|GO:0006355
Mupr9539g00003 598 Coils Coil 84 111 - -
Mupr9539g00003 598 Pfam Seed dormancy control 154 228 IPR025422 GO:0006351|GO:0043565
Mupr9539g00003 598 PANTHER TRANSCRIPTION FACTOR TGA9 1 348 - -
Mupr9539g00003 598 Pfam DnaJ domain 405 472 IPR001623 -
Mupr9539g00003 598 ProSiteProfiles DOG1 domain profile. 135 346 IPR025422 GO:0006351|GO:0043565
Mupr9539g00003 598 Coils Coil 60 80 - -
Mupr9539g00003 598 SMART dnaj_3 403 467 IPR001623 -
Mupr9539g00003 598 FunFam Chaperone protein dnaJ 390 495 - -
Mupr9539g00003 598 Gene3D - 64 114 - -
Mupr9539g00003 598 PRINTS DnaJ domain signature 424 439 IPR001623 -
Mupr9539g00003 598 PRINTS DnaJ domain signature 493 512 IPR001623 -
Mupr9539g00003 598 PRINTS DnaJ domain signature 406 424 IPR001623 -
Mupr9539g00003 598 PRINTS DnaJ domain signature 447 467 IPR001623 -
Mupr9539g00003 598 Gene3D DnaJ domain 389 488 IPR036869 -
Mupr9539g00003 598 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 68 83 IPR004827 GO:0003700|GO:0006355
Mupr9539g00003 598 ProSiteProfiles dnaJ domain profile. 404 475 IPR001623 -
Mupr9539g00003 598 FunFam BZIP family transcription factor 64 113 - -
Mupr9539g00003 598 Coils Coil 146 166 - -
Mupr9539g00003 598 CDD DnaJ 405 464 IPR001623 -
Mupr9539g00003 598 ProSitePatterns Nt-dnaJ domain signature. 452 471 IPR018253 -
Mupr9539g00003 598 SUPERFAMILY Leucine zipper domain 65 98 IPR046347 GO:0003700|GO:0006355
Mupr9539g00003 598 Pfam bZIP transcription factor 65 93 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9539g00003 Mupr-Chr9539 12698 19933 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9539g00003 1 350 Calmodulin-binding Proteins AT1G22070 55.707 5.01e-124 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mupr9539g00003 DOG1 1.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9539g00003 K14431 - gmx:100794268 588.571