Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9537g00001 ATGTCGACGCAGAATCGTCGTTCGTCGTTTTCTTCCTCAACGGCGTCGTCTTTGGCGAAACGGCATCAGTCAGTGTCGTCGTCTGGCAAGGCTAAAGCGCTTCCTCCTCAGCACGCCGCCAAGAAGAGACCGCCTCTCGCCAATGTTACCAATCAGAACGTGTCTTCTTCGGTGGCAAGTTCAATTAAAATTGGCAAGGATAAGAAAGAGGCTCCTGCAAGAACTAGCATCACAAGATCAACAATTTGTGGCAACAAATTACCAGAGTTAAAAACTGTTAACTCAAGCACAGCTGTTATTTCAAAGGCTAATTCTTTACCACAAAGGAAGAATGTTCGGAGCAGCATCGATGTTTTTACTAATGAATCGGATGGGAGGTCCGTTTCTATGGATGAGACAATGTCTTCTTGTGATTCTATCAAGAGTCCTGAAGTTGAATATCTGGACAACATGGATGTTTCAGCTGTTGATTCAAATCAGAGAAAGACAATAAGCAATTTTAATATTTCTGATACTATAGAGCCAGAAGGTTGTTATCTTCAAGTTGAATTGTATGGTCAAGCTTTAAGGAAAAGTAATTTGGCCAATCAAATTTTGGATTGTGATCTTGTTTACTTATTGGTAGTGAATAGGGAAATAATTGTTGGGTTGGAAAGAGAGGACAAGATTGTCATTATCGATAACATTTCATCTGATCCGCAGCTTTGTGCAACCTATGTTTGTGACATCTACAAGCACCTACGTGAATCTGAGGTAAAGAAAAGGCCTTCCACTGACTTCATGGAGAGAATTCAGGAGGATATAAATGTTAGCATGCGTGCTATATTGATTGACTGGCTTGTTGAGGTGGCTGAGGAGTATCGGCTTGTACCTGAAACATTGTATTTGACAGTGAACTACATTGATCGGTATCTTTCAGGGAATGCTATGAATAGGCAAAGGTTACAATTACTTGGTGTTTCCTGCATGATGATTGCCTCTAAATATGAGGAAATTTGTGCACCACGGGCGGAAGAATTTTGTTTTATAACTGATAATACGTACCTAAAAGAAGAGGTTTTGCAAATGGAATCTGCTGTCTTGCATTATCTGAAGTTTGAAATGACAGCCCCAACAGTAAAATGTTTCTTAAGACACTTTGTTCGTGCAGCTTCTCAAGATGTTCAGGAGCACCCTTTACTTCAACTAGAGTGCTTAACCAACTATATTGCCGAATTATCTCTCTTGGAGTACAAGATGCTCTGTTATCCTCCATCGTTGATAGCTGCTTCTGCAATTTTCCTAGTCAGATTTATTCTTTTTTTCCCTTCACAGAAACCATGGAACTCCACATTGCAGCATTACACGCTTTACCGGCCTTCTGATCTGTGTGCATGTGTAAAAGATCTCCATCATCTTTGTTGCAGCAGTCATAATAATTCTAATTTACCTGCAATCCGAGAGAAATACAGTCAGCATAAGTACAAATGTGTTGCCAAGAAGTACATCCCTTCTTCAATACCTCAAGAA 1509 0.4023 MSTQNRRSSFSSSTASSLAKRHQSVSSSGKAKALPPQHAAKKRPPLANVTNQNVSSSVASSIKIGKDKKEAPARTSITRSTICGNKLPELKTVNSSTAVISKANSLPQRKNVRSSIDVFTNESDGRSVSMDETMSSCDSIKSPEVEYLDNMDVSAVDSNQRKTISNFNISDTIEPEGCYLQVELYGQALRKSNLANQILDCDLVYLLVVNREIIVGLEREDKIVIIDNISSDPQLCATYVCDIYKHLRESEVKKRPSTDFMERIQEDINVSMRAILIDWLVEVAEEYRLVPETLYLTVNYIDRYLSGNAMNRQRLQLLGVSCMMIASKYEEICAPRAEEFCFITDNTYLKEEVLQMESAVLHYLKFEMTAPTVKCFLRHFVRAASQDVQEHPLLQLECLTNYIAELSLLEYKMLCYPPSLIAASAIFLVRFILFFPSQKPWNSTLQHYTLYRPSDLCACVKDLHHLCCSSHNNSNLPAIREKYSQHKYKCVAKKYIPSSIPQE 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9537g00001 503 PANTHER CYCLINS 159 490 IPR039361 -
Mupr9537g00001 503 PIRSF Cyclin_A_B_D_E 1 178 IPR046965 GO:0016538|GO:0044772
Mupr9537g00001 503 PIRSF Cyclin_A_B_D_E 191 502 IPR046965 GO:0016538|GO:0044772
Mupr9537g00001 503 SMART cyclin_7 278 362 IPR013763 -
Mupr9537g00001 503 SMART cyclin_7 375 465 IPR013763 -
Mupr9537g00001 503 SMART Cyclin_C_2 371 497 IPR004367 -
Mupr9537g00001 503 CDD CYCLIN_AtCycA_like_rpt1 232 367 - -
Mupr9537g00001 503 MobiDBLite consensus disorder prediction 46 62 - -
Mupr9537g00001 503 CDD CYCLIN_AtCycA-like_rpt2 371 488 - -
Mupr9537g00001 503 MobiDBLite consensus disorder prediction 1 31 - -
Mupr9537g00001 503 FunFam Mitotic cyclin 6 256 356 - -
Mupr9537g00001 503 ProSitePatterns Cyclins signature. 273 304 IPR006671 -
Mupr9537g00001 503 SUPERFAMILY Cyclin-like 231 368 IPR036915 -
Mupr9537g00001 503 Pfam Cyclin, N-terminal domain 242 368 IPR006671 -
Mupr9537g00001 503 MobiDBLite consensus disorder prediction 1 77 - -
Mupr9537g00001 503 FunFam Cyclin A1 358 493 - -
Mupr9537g00001 503 Gene3D - 242 493 - -
Mupr9537g00001 503 Gene3D - 256 369 - -
Mupr9537g00001 503 Pfam Cyclin, C-terminal domain 371 493 IPR004367 -
Mupr9537g00001 503 SUPERFAMILY Cyclin-like 371 499 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9537g00001 Mupr-Chr9537 19037 22372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9537g00001 4 503 Core Cell Cycle Gene Families AT1G44110 56.574 1.78e-179 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9537g00001 K06627 - gmx:100776207 685.256