Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9496g00003 ATGTCCATAGATTCCCCAAACCACCCAACTCCTGATTTGTACTGCAGGGAAGCAACTAGCGAAGTGACTCACTTGGACTCCGACGAGGATTTGAAGTTGATTAATGTTCTATGGGGAGACTCCGATGGTGACGAAACTTGTCTATTGAGCTTATTAGAATCCGAACACGATCAAGTACAGGAACAAACAAAGTCACTAGGACAACTTGGCAAAAAAACATGGTTGATTAATGCTCGAGAAGAGGCCATAAAATGGATCCTAAAGGTGCATGCTTACTACAGTTTTAGACCCGAGACAGCGTATCTTTCTGTAAATTACCTCGATCGTTTCCTCTTGTCACACACCTTGACGCAAGATAAAGCATGGCCTCTGCAGCTGTTATCAGTGGCTTGTCTTGCACTTGCAGCAAAAATGGAAGAAACCAAAGTGCCACTTCTTTTAGACCTGCAAGTGATCCAGTCCAACTTCCTGTTTAAGCCCAAAACGGTTCAGAGGATGGAGCTTTTGGTTATGGCTACTCTCAAGTGGCGATTGCGCACTATAACCCCTTTTGATTTCCTCCATTTTTTCATTGCCAAGCTTTCTTGCTCTGCTTCCACATGGGGAGATTTAAGTTACATTGTTTCTCGTGTCTCAGATGTTATTATCAGAACATGTCTAGTGATGGATTTCTTGGAGTTTTCACCATCCACAATAGCAGCAGCCGCACTGTTATGGGTAACCAATCAATGTGTAGATGACAAGAAATCAGATTGCTTCCACAAGAATATAAGCATAGAGATGGTGCAGAGATGTTACAAACTAATGAAGAAGAAATTAGTCATTCGCCGATCAGAACTTTATTGGCCAAAGACTTTGCAATTATTGCCCCGAAGTCCTACCTGTGTGCTTGATCATGCAGCTATGCAAGAAAGCAGTGATGCTCACAAGCCCTGA 936 0.4284 MSIDSPNHPTPDLYCREATSEVTHLDSDEDLKLINVLWGDSDGDETCLLSLLESEHDQVQEQTKSLGQLGKKTWLINAREEAIKWILKVHAYYSFRPETAYLSVNYLDRFLLSHTLTQDKAWPLQLLSVACLALAAKMEETKVPLLLDLQVIQSNFLFKPKTVQRMELLVMATLKWRLRTITPFDFLHFFIAKLSCSASTWGDLSYIVSRVSDVIIRTCLVMDFLEFSPSTIAAAALLWVTNQCVDDKKSDCFHKNISIEMVQRCYKLMKKKLVIRRSELYWPKTLQLLPRSPTCVLDHAAMQESSDAHKP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9496g00003 311 FunFam D6-type cyclin 176 267 - -
Mupr9496g00003 311 FunFam D6-type cyclin 62 175 - -
Mupr9496g00003 311 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Mupr9496g00003 311 Gene3D - 51 266 - -
Mupr9496g00003 311 CDD CYCLIN_AtCycD-like_rpt2 181 269 - -
Mupr9496g00003 311 Pfam Cyclin, C-terminal domain 181 273 IPR004367 -
Mupr9496g00003 311 CDD CYCLIN_AtCycD-like_rpt1 78 176 - -
Mupr9496g00003 311 SMART Cyclin_C_2 181 306 IPR004367 -
Mupr9496g00003 311 Pfam Cyclin, N-terminal domain 53 178 IPR006671 -
Mupr9496g00003 311 SUPERFAMILY Cyclin-like 70 178 IPR036915 -
Mupr9496g00003 311 SMART cyclin_7 84 172 IPR013763 -
Mupr9496g00003 311 Gene3D - 61 179 - -
Mupr9496g00003 311 SUPERFAMILY Cyclin-like 163 278 IPR036915 -
Mupr9496g00003 311 PANTHER CYCLINS 64 274 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9496g00003 Mupr-Chr9496 34303 35975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9496g00003 56 289 Core Cell Cycle Gene Families AT1G70210 44.628 3.64e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9496g00003 K18810 - gmx:100799323 530.406