Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9487g00003 ATGACGACTCGGTTCAAGAAGAACAGGAAGAAGAGAGGTCACGTGAGCGCCGGACACGGCCGTATCGGGAAACACCGGAAGCATCCCGGAGGTCGAGGTAACGCCGGTGGCATGCATCACCACCGTATCCTCTTTGACAAGTACCATCCCGGTTACTTCGGTAAGGTCGGTATGCGTTACTTTCACAAGCTCCGCAACAAGTTCCATTGCCCCATCGTCAACATCGACAAGCTCTGGTCCCTTCTTCCCCAAGAGGCCAAGGACAACGCTTCCGCCGACAAGGCCCCCTTGCTCGACGTAACACAGTTCGGTTACTTTAAGGTTCTCGGCAAAGGGGTTTTGCCTCAGAACCAGCCTCTCGTCGTTAAGGCCAAGCTTGTCTCCAAAATCGCTGAGAAGAAGATCAAGGAGGCCGGCGGAGCCGTCGGAAGGCAAACTTGGTTACAAATAGCCTTCCTAAACATGGCATGGCTACTGCGCCTTTTTGGTGGCCAGTGTTTTGAAGTTCTCGAGTCTTTTGCTTCGATTCCTTCTTAA 537 0.5307 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFHCPIVNIDKLWSLLPQEAKDNASADKAPLLDVTQFGYFKVLGKGVLPQNQPLVVKAKLVSKIAEKKIKEAGGAVGRQTWLQIAFLNMAWLLRLFGGQCFEVLESFASIPS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9487g00003 178 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 142 - -
Mupr9487g00003 178 FunFam 60S ribosomal protein L27a 58 145 - -
Mupr9487g00003 178 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 IPR021131 -
Mupr9487g00003 178 Hamap 50S ribosomal protein L15 [rplO]. 1 145 IPR030878 GO:0003735|GO:0006412|GO:0015934
Mupr9487g00003 178 Gene3D - 58 144 - -
Mupr9487g00003 178 SUPERFAMILY Ribosomal proteins L15p and L18e 6 143 IPR036227 -
Mupr9487g00003 178 ProSitePatterns Ribosomal protein L15 signature. 107 139 IPR001196 GO:0003735|GO:0005840|GO:0006412
Mupr9487g00003 178 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9487g00003 Mupr-Chr9487 10173 12073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9487g00003 1 142 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 84.507 4.67e-88 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9487g00003 K02900 - gmx:100527293 292.352