Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9487g00001 ATGAGAGAAAGGAGCATAGTAGGACGTGTGAATAAGCAAAAGAAGCGAGTGTCCTTCCGTCACTGTCAAATAGCAAACGTGGGCGCGGAAACCCTAGCGTCTCACCAGATGAATCCCTACGACAGTAGATACTCCGACGCCTCTTCTTTTCGCGGCCGTCGCAGTGATTTCGTTGGATCTATTCCGCCGTCGTCTTTCGTCAGCCGCGGTGGCGCGATACCCTACGGTGCTCCTTACGGCGTCTCTGGACCCAACGGTTTTGGATCCGCACCCATTCCCCCGATTCCACCCTTTGTACCCCCTTCTGGGAGCTTTAACATAGGCCGAGGGGGTGGTAGAGTGGGCAATGGTCACGTGAGTGATAGAAAACATGACATAGGTCGCGGTGGCGGTGGAAGAGGTCGCGGCGGTGGCGGTAGAGCCGGAGGTCATGGTTTTAGGGGCTCCGGGAGAGGAGGTAGACACGGTGGTGGATCTTCCAGGGACGATTTGAACAACATTGCACTCCCGAAGCAAGATTTCAAGAATTTGGTCCCTTTTGAGAAGAACTTCTACGTTGAGTGCCCTGCGGTAAGGGCCATGTCTGATCAAGAAGTTATGCATTACCGTGTCAATAGAGAGATCACCGTGCAAGGGCAGGACGTGCCGAAGCCTGTACGGATGTTTCATGAGGCGAATTTCCCTGATTACTGCCTTGAGGTCATTGCCAATCTGGGTTTTGCTGAGCCCACTCCAATTCAGGCTCAGGGTTGGCCCATGGCTCTGAAGGGTAGAGATTTAATTGGCATTGCGGAGACTGGCTCGGGTAAAACTTTGGCGTATGTGCTTCCTGCTTTAGTGCATGTCAACGCACAACCTCGATTGCTACATGGGGACGGTCCCATTGTCTTAGTTTTAGCACCAACTAGAGAGTTAGCTGTTCAAATTCAAGAAGAGGCTCTTAAATTTGGGTCTCGGGCAAATATTAGAAGTACATGCGTATATGGGGGTGCACCAAAGGGCCCCCAAATCCGTGAGCTTAGAAGAGGAGTTGAAATTGTTATTGCTACACCTGGTCGTCTAATAGATATGTTGGAAGCTCAGCACACAAACCTGCAGAGAGTGACTTACCTTGTCTTGGATGAAGCTGATCGAATGCTGGACATGGGTTTTGAACCTCAGATACGGAAAATTGTTAGCCAGATTCGACCAGATAGGCAAACATTATTATGGAGTGCTACATGGCCAAGGGAAGTTGAAACTCTGGCAAGGCAGTTTCTGCGCAACCCGTACAAGGTAATTATTGGGTCACCTGAGCTGAAGGCAAATCAATCTATAAATCAAGTTGTTGAAGTTATGACAGACATGGATAAATACAATAGATTGATCAGACTGCTGAAAGAAGTGATGAATGGGAGCCGAATTCTAATATTTATGGAGACAAAAAAGGGATGTGATCAAGTTACGAGACAATTGAGAATAGATGGATGGCCAGCACTATCCATCCATGGTGATAAAAACCAGGCTGAAAGGGACTGGGTCTTGGCTGAATTTAAGAGTGGCAGAAGTCCAATAATGACTGCCACTGATGTTGCTGCACGGGGTCTTGATGTGAAAGACATAAAATGTGTGATCAATTATGATTTTCCATCAAGCCTGGAAGATTATGTCCACAGAATTGGTCGAACTGGTCGTGCAGGGGCTAAAGGGACTGCATATACCTTTTTTACACATGCCAATGCGAAGTTTGCTAGGGATCTGATTAAAATTTTACAAGACGCTGGTCAAGTTGTGAGTCCTGCATTGTCTGCATTGGTTCGGTCAGCTGGTTCTGGTCAATTTGGATCTGGGGGAGGTTTTCGCTCAAGAGGACGAGGAGGCTACGGAAATCGAGGTTCAATATCAGGTTCCAATGCCATTCCTCTAGGTTCGAAGAGGCCTTGGCAGTTTCTATAG 1935 0.4806 MRERSIVGRVNKQKKRVSFRHCQIANVGAETLASHQMNPYDSRYSDASSFRGRRSDFVGSIPPSSFVSRGGAIPYGAPYGVSGPNGFGSAPIPPIPPFVPPSGSFNIGRGGGRVGNGHVSDRKHDIGRGGGGRGRGGGGRAGGHGFRGSGRGGRHGGGSSRDDLNNIALPKQDFKNLVPFEKNFYVECPAVRAMSDQEVMHYRVNREITVQGQDVPKPVRMFHEANFPDYCLEVIANLGFAEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYVLPALVHVNAQPRLLHGDGPIVLVLAPTRELAVQIQEEALKFGSRANIRSTCVYGGAPKGPQIRELRRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRNPYKVIIGSPELKANQSINQVVEVMTDMDKYNRLIRLLKEVMNGSRILIFMETKKGCDQVTRQLRIDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAYTFFTHANAKFARDLIKILQDAGQVVSPALSALVRSAGSGQFGSGGGFRSRGRGGYGNRGSISGSNAIPLGSKRPWQFL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9487g00001 644 CDD DEADc_DDX5_DDX17 232 426 - -
Mupr9487g00001 644 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 454 599 IPR001650 -
Mupr9487g00001 644 FunFam ATP-dependent RNA helicase RhlB 430 602 - -
Mupr9487g00001 644 Pfam Helicase conserved C-terminal domain 450 560 IPR001650 -
Mupr9487g00001 644 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 372 380 IPR000629 -
Mupr9487g00001 644 Gene3D - 433 602 IPR027417 -
Mupr9487g00001 644 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 251 426 IPR014001 -
Mupr9487g00001 644 Gene3D - 193 432 IPR027417 -
Mupr9487g00001 644 MobiDBLite consensus disorder prediction 605 625 - -
Mupr9487g00001 644 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 220 248 IPR014014 GO:0003724
Mupr9487g00001 644 MobiDBLite consensus disorder prediction 116 130 - -
Mupr9487g00001 644 CDD SF2_C_DEAD 439 569 - -
Mupr9487g00001 644 Pfam DEAD/DEAH box helicase 244 415 IPR011545 GO:0003676|GO:0005524
Mupr9487g00001 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 292 580 IPR027417 -
Mupr9487g00001 644 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 197 598 - -
Mupr9487g00001 644 MobiDBLite consensus disorder prediction 109 166 - -
Mupr9487g00001 644 SMART helicmild6 479 560 IPR001650 -
Mupr9487g00001 644 FunFam probable ATP-dependent RNA helicase DDX17 182 429 - -
Mupr9487g00001 644 SMART ultradead3 239 442 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9487g00001 Mupr-Chr9487 1567 8484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9487g00001 205 580 Eukaryotic Initiation Factors Gene Family AT3G19760 34.574 1.05e-70 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9487g00001 K12823 - gmx:100777610 993.801