Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9486g00001 ATGATAGTTAAGCGGACAATGAAAACCGAAACGCCGAACCTTAAACGGTGTAAGATGGAAGAGGCCGATTCCGATAATGCGATTCCGAAGAAGCGTAGGGTGAACGGGTTTTACTCTCTCGGCATGCCAGGGGATGCTGAATATTTCAGCAGCGGTTCTGGTTCTTGGAGCAGCGAAGGGTCGTATTGGGGTGGTGGTGGTGGTGGTGGTGAGGTTCAGTCCAATTCGAATTCCGTGCCGTTAAATCGCAAAACGGCGGCGCGTCGGCCTCCGCTGCTGCGGTCCTCACGTGGGCGCCTCCAGACGCTTCCGTCGAGGTTCAACGACTCGGTTCTTGACACGTGGAAGAAAGCTGAGGAGAACGGAGAGTCGAGCTTTGAAGATGGTGATAAGAGTTTTGTGGAGGATGGTAGGGGTGGCATTGGTGTAAAAGTGGAGAAGAGTGATAGTGTGTGTTATTCGTCTAGTGTGGGTAGAAGGACTGTTGTTATGGCTGAGAGTAATACTTCTGGTCTTAGTTTTGAGGGTGTGGACCAGAAGCCCATCGATGAGAAGAGGAAGGAGGTTTATAAGCCGGAGGATTTTGCTTTGGGTGATATAGTTTGGGCTAAGTGTGGGAAGAGGTATCCGGCTTGGCCTGCTGTGGTCATTGATCCTGTCTTGGAGGCTCCCAACTCCGTCCTCAGCTGTTGCGTTCCTGGCGCGCTTTGCGTGATGTTTTTTGGTTATTCGAAAAATGGATCTCAGAGGGTATATAAAGTTCTTTCCCGAGTCTTGTTTATGGTCATGGATTTGTTGTGTTTTTGGTTGTGGAATGACGGTGTAGGACTATGCGTGGGTGAAGCAGGGAATGGTGTTCCCCTTCTTGGAATTCATGGACAGGGGCAGACCCGATTGTACAAGAGCAAACCGAGTGACTTTCGCATGGCACTGGAGGAGGCAATGCTGGCAGAAGATGGTGTTTTGGAATCACATTTGGGAGGAGAGGAAGTAACTGATGTCGAAGCTCATCCTGATGAACTTATGGAGGCCACCGGTTCGTATGTTGATGAGGAATATTGCGGCCAGGATCAGTGGATATATTGTGCAGGATACAAGTTAAGAAAATCAAAACAATATTGTGGCATTTGCAAAAGGATTTGGCATCATTCAGATGGTGGGAAATGGGATCTGGAAAATACAGATTACTATTGTCCAGAGTGCAAGGGAAAATTCAATTGTAGATTACCAGCATCGCAAACATACAAGTCAAAAATCAAATCAATAGAGAGTAGCCAAAAACCTATGATACCCGAGAAAGTATTGGTGGTGTGTAATGGCATGGAAGGAATTTACATCCCAAAGCTTCATCTAGTCATGTGCAAGTGTGGCTCTTGTGGTACAAGGAAGCAGACACTTAGTGAATGGGAAAAACATACAGGTTGCAGAGCAAAAAAATGGAAACATAGTGTGAAAGTGAAAAGTACAATGCTACCACTGGAAAAATGGATGGCAGAACACATTCCACTAGATGGAATACCCCAGCAGTTAGATCAACAGCAGGTGCTGGCCTTTTTGCAAGAGAAGTATGAGCCAGTTAATGCAAAATGGACAACAGAAAGATGTGCTGTTTGCAGATGGGTTGAAGATTGGGAAGATAACAAAATTATTATTTGCAACAGATGCCAGATAGCAGTTCACCAAGAATGCTATGGGGCAAAGAATGTTCAGGATTTTACTTCTTGGGTTTGTAGAGTATGTGAAACTCCTGATGTTGAGAGGGAGTGTTGCCTCTGCCCAGTAAAAGGCATGTCACATTTACCAACTGATGTTGAAATGTTGTGGGTTCATGTAACATGTGCTTGGTTTCGACCTCAAGTTGTTTTTCAAAACCATGAGGCCATGGAACCTGCCATGGGAATCCTTAAAATTCCTCCTAATTCCTTTGTGAAGACTTGTGTGATCTGTAAACAGAGCCATGGTTCCTGTATAACTTGTTGCAAGTGTGCTACTTATTTTCATGTGATGTGTGCATCAAGGGCAGGATATACAATGGAATTGCATTCCATGGAGAAGAATGGGACTCAAATAACAAAGAAGCTAATATATTGTGCAATTCACAGGGTCCCAAATCCAGATTCAGTACTGGTCATACACACACCCCTGGGGATTTTCTCTCCCAGAACTTCACTTCAAAATCAGAAGGGATGCTTCAGGGGATCAAGGCTAATTTCATCAAAGAATATAGAGCTTAATGAATCTTCAACCACTGAAAATGACGTGGTTGATTCGCTGTCTGCTGCCAGATGTTGTGTGTACCGAAGGTCTCCTAATAAGGTGAGGGCTGATGTGCCAATAATTCACTTGCTGAGGGGACCTAGCCTTCATTCTTTAGGGGCAATAACTCAGTTGAACCACTATAAGGATGCTGACGAATCCAAAGTATTCACTTCTTTCAAGGAACGTCTTCACCATTTATGGAAAATGGAAAAATTTAAAGTTTGCTTTGGAAAATCGGGCATTCATGGATGGGGTCTCTTTGCTCGTAGAGATATACAAGAAGGAGAGATGGTTGTCGAGTATCGTGGTGAGCATGTAAGGCGTAGTGTTGCTGATCTGAGGGAAGCCAAATATCGTTCAGAAGGCAAAGATTGCTATCTGTTCAAGATCAGTGAGGAAGTGGTAGTTGACGCAACGCACTGGGGCAATATAGCACGTTTAATAAACCATTCTTGTATGCCAAACTGTTATGCAAGGATTATGAGTCTGGGTGATCAGGAGAGCCGAATTGTTCTTATTGCCAAGACCAATGTTTCCGCTGGTGAAGAACTAACGTATGATTACCTGTTTGATCCAGATGAGCGGGATGAACTGAAAGTTCCCTGCCTTTGCAAAGCCCCCAATTGTAGGAGATTTATGAATTAG 2904 0.4459 MIVKRTMKTETPNLKRCKMEEADSDNAIPKKRRVNGFYSLGMPGDAEYFSSGSGSWSSEGSYWGGGGGGGEVQSNSNSVPLNRKTAARRPPLLRSSRGRLQTLPSRFNDSVLDTWKKAEENGESSFEDGDKSFVEDGRGGIGVKVEKSDSVCYSSSVGRRTVVMAESNTSGLSFEGVDQKPIDEKRKEVYKPEDFALGDIVWAKCGKRYPAWPAVVIDPVLEAPNSVLSCCVPGALCVMFFGYSKNGSQRVYKVLSRVLFMVMDLLCFWLWNDGVGLCVGEAGNGVPLLGIHGQGQTRLYKSKPSDFRMALEEAMLAEDGVLESHLGGEEVTDVEAHPDELMEATGSYVDEEYCGQDQWIYCAGYKLRKSKQYCGICKRIWHHSDGGKWDLENTDYYCPECKGKFNCRLPASQTYKSKIKSIESSQKPMIPEKVLVVCNGMEGIYIPKLHLVMCKCGSCGTRKQTLSEWEKHTGCRAKKWKHSVKVKSTMLPLEKWMAEHIPLDGIPQQLDQQQVLAFLQEKYEPVNAKWTTERCAVCRWVEDWEDNKIIICNRCQIAVHQECYGAKNVQDFTSWVCRVCETPDVERECCLCPVKGMSHLPTDVEMLWVHVTCAWFRPQVVFQNHEAMEPAMGILKIPPNSFVKTCVICKQSHGSCITCCKCATYFHVMCASRAGYTMELHSMEKNGTQITKKLIYCAIHRVPNPDSVLVIHTPLGIFSPRTSLQNQKGCFRGSRLISSKNIELNESSTTENDVVDSLSAARCCVYRRSPNKVRADVPIIHLLRGPSLHSLGAITQLNHYKDADESKVFTSFKERLHHLWKMEKFKVCFGKSGIHGWGLFARRDIQEGEMVVEYRGEHVRRSVADLREAKYRSEGKDCYLFKISEEVVVDATHWGNIARLINHSCMPNCYARIMSLGDQESRIVLIAKTNVSAGEELTYDYLFDPDERDELKVPCLCKAPNCRRFMN 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9486g00001 967 Pfam PHD-finger 547 581 - -
Mupr9486g00001 967 Pfam SET domain 836 941 IPR001214 GO:0005515
Mupr9486g00001 967 MobiDBLite consensus disorder prediction 59 83 - -
Mupr9486g00001 967 FunFam Histone-lysine N-methyltransferase 584 703 - -
Mupr9486g00001 967 ProSitePatterns Zinc finger PHD-type signature. 535 580 IPR019786 -
Mupr9486g00001 967 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 529 583 IPR013083 -
Mupr9486g00001 967 SMART PostSET_3 951 967 IPR003616 -
Mupr9486g00001 967 Gene3D - 428 513 IPR010919 -
Mupr9486g00001 967 Gene3D SET domain 805 967 IPR046341 -
Mupr9486g00001 967 ProSiteProfiles Post-SET domain profile. 951 967 IPR003616 -
Mupr9486g00001 967 FunFam Histone-lysine N-methyltransferase 799 967 - -
Mupr9486g00001 967 ProSiteProfiles SET domain profile. 825 942 IPR001214 GO:0005515
Mupr9486g00001 967 SMART PHD_3 645 701 IPR001965 -
Mupr9486g00001 967 SMART PHD_3 534 581 IPR001965 -
Mupr9486g00001 967 Pfam PHD-zinc-finger like domain 588 700 - -
Mupr9486g00001 967 CDD SET_SETD1-like 814 963 - -
Mupr9486g00001 967 Gene3D - 184 257 - -
Mupr9486g00001 967 SUPERFAMILY Tudor/PWWP/MBT 188 346 - -
Mupr9486g00001 967 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 967 IPR025780 -
Mupr9486g00001 967 ProSiteProfiles Zinc finger PHD-type profile. 532 583 IPR019787 -
Mupr9486g00001 967 ProSiteProfiles Extended PHD (ePHD) domain profile. 586 701 IPR034732 -
Mupr9486g00001 967 SUPERFAMILY SET domain 819 963 IPR046341 -
Mupr9486g00001 967 SUPERFAMILY FYVE/PHD zinc finger 533 594 IPR011011 -
Mupr9486g00001 967 CDD PHD_ATX3_4_5_like 534 580 IPR042011 -
Mupr9486g00001 967 SMART set_7 825 948 IPR001214 GO:0005515
Mupr9486g00001 967 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 584 702 IPR013083 -
Mupr9486g00001 967 PANTHER PHD FINGER PROTEINS 55 944 - -
Mupr9486g00001 967 Pfam PWWP domain 198 251 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9486g00001 Mupr-Chr9486 1893 10250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9486g00001 535 687 C2H2 Transcription Factor Family AT3G14740 32.500 1.76e-17 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr9486g00001 zf-HC5HC2H_2 8.2e-25 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9486g00001 - - gmx:100793624 1622.06