Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9485g00001 ATGGCGGGTTTATTCTCACTAGGAGGGAGAGGGAACAGCAACAGCCAAGAGGAAATTCCTCCTCCGGATAGCTTATTCTGGTATAACAAGAATGACGATGTTTCCTCCTACCGAGGTGGCGGTTTTGAGCTATGGAACCAGCAACAGTTACAGCAACAACAACTCATGGGGCAGGCCTCTCAACCAAGGCCTCTCTTCCACCAAGATCTCTACTCCGCGTTAGGAGTTGGGCCCAGCAGGCCCATCTCCGATGATCAGTCGTCGTCGAGATCCGGGTTCATGGTGGCAGGAAGCGGTAGCGGTGGAATTAGCTGTCAGGACTGCGGGAACCAAGCGAAGAAGGATTGCCCTCACATGCGATGCCGAACGTGCTGCAAGAGTCGTGGGTTCGATTGCCAAACCCATGTTAAGAGCACTTGGGTCCCCGCTTCGAGGCGTCGCGAAAGACAACAACAACAACAACTCGCTGCTTTGCAACAACAAAACCGGGAACCTTCTGGAGACCTTCCCAAAAGGCAGAGAGAGAGAGAAAGAGATCATAACCCAAACAACTCTCTCGCCTGCACTCGTTTGCCTTCAATCCCCTCCCCCTCAGGGTTAGAGGAGGTGAGTTTCCCGGCTGTGGTGAGGTCTGCTGCGGAGTTCAGATGCGTACGTGTGAGCTCAGTGGAGGAGGAGGCGGAGGAGGAGTACGCTTACTCAACGGCTGTGAACATTGGAGGGCATTTGTTCAAAGGAATTTTATATGACTATGGTCCAGAAGGTAACAGTGGTTACATGGGTGGTGGGGAAAGCTCCTCCACCGGTGTTGGTGGCTTGAACCTCACTACTGGTGCCGTTGCGTCTGCACCACTCGTTGATCCTTCTTCTTCCTTGTATCCGGCTCCTCTTAACACCTTCATGCCTGGTAGCGGTACGCAATTCTTCCCTCACCCACGATCTTGA 945 0.5323 MAGLFSLGGRGNSNSQEEIPPPDSLFWYNKNDDVSSYRGGGFELWNQQQLQQQQLMGQASQPRPLFHQDLYSALGVGPSRPISDDQSSSRSGFMVAGSGSGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASRRRERQQQQQLAALQQQNREPSGDLPKRQRERERDHNPNNSLACTRLPSIPSPSGLEEVSFPAVVRSAAEFRCVRVSSVEEEAEEEYAYSTAVNIGGHLFKGILYDYGPEGNSGYMGGGESSSTGVGGLNLTTGAVASAPLVDPSSSLYPAPLNTFMPGSGTQFFPHPRS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9485g00001 314 NCBIfam LRP1 C-terminal domain 205 253 IPR006511 -
Mupr9485g00001 314 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 298 IPR007818 GO:0003700|GO:0006355
Mupr9485g00001 314 MobiDBLite consensus disorder prediction 141 193 - -
Mupr9485g00001 314 MobiDBLite consensus disorder prediction 141 166 - -
Mupr9485g00001 314 MobiDBLite consensus disorder prediction 167 183 - -
Mupr9485g00001 314 NCBIfam putative zinc finger domain, LRP1 type 104 146 IPR006510 -
Mupr9485g00001 314 Pfam Domain of unknown function (DUF702) 102 254 - -
Mupr9485g00001 314 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9485g00001 Mupr-Chr9485 12266 13813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9485g00001 1 314 C2H2 Transcription Factor Family AT3G51060 43.846 3.17e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mupr9485g00001 DUF702 1.5e-62 No_clan