Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr947g00006 ATGGAGCTTTCTCAACTTGGTTTCCTAGATGAGTTAGTAGCTCCAAGAAGAGACACATGTACTGCTTTGTCCACTGGGTTCTGTGAGCTATTGCCTAATGGTTGGAGTTTTGACTCTTTTCTTGAGAACCCTTCTTTGGCCACTTCAAACTCCCTATTTGGTGCATTTTCAGCATCACTAGACCGCAGATTCGAATGCTCTTTCAGCAATGAAGTAGCAGCATACCCGTTTGCTGATGGGTTCACAATGCCATTGCCAGAACTTGACACTGGGAACGATGACCCTCCACCACTTCCACCATCACTGGAGGATGAAGATATTGGCTTTCATGACAATAACTTTGAAGAAACCAAGAGTGACTGCAAAGTTGAGGAACAAGGCACAGAGATTTCACTCTTCAACATAGGCATGTATGATGACGATGGAGAGAGAAAACCAAAGTCCAAGAAGCAACAAGGACAGCCCTCAAAGAATCTCATGGCAGAAAGGAGGAGAAGAAAGCGTCTCAATGACCGTCTTTCCATGCTAAGGTCAATAGTCCCCAAGATCAGCAAGATGGACAGGACCTCTATTCTTGGGGATACCATAGACTACATGAAAGAGCTTCTGGAAAGGATTGGTAAGTTGCAAGAGGAAGAGGGGGAAGAGGGAAAAAGTCAGAAAAATCTATTGGGCATTTCAAAGGAACAACTCAAGCCCAATGAGGCAATAGTAAGAAACTCCCCCAAGTTTGATGTTGAGAGGAGAGAGCAGGACACCAGAATCAGCATCTGCTGTGCCACAAAGCCTGGATTGCTACAATCAACTGTCAATACCTTAGAAGCACTAGGCCTTGAGATTCGGCAATGTGTTATAAGCAGCTTCAATGACTTTTCTATGGAAGCATCTTGCTCTGATGTAGCTGAACAGAGAAATTGTATTAGCCCTGAAGAGGTAAAACAAGCACTATTCAGAAATGTTGGCTTTGGTGGGAAATGTCTCTAG 984 0.4411 MELSQLGFLDELVAPRRDTCTALSTGFCELLPNGWSFDSFLENPSLATSNSLFGAFSASLDRRFECSFSNEVAAYPFADGFTMPLPELDTGNDDPPPLPPSLEDEDIGFHDNNFEETKSDCKVEEQGTEISLFNIGMYDDDGERKPKSKKQQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEEEGEEGKSQKNLLGISKEQLKPNEAIVRNSPKFDVERREQDTRISICCATKPGLLQSTVNTLEALGLEIRQCVISSFNDFSMEASCSDVAEQRNCISPEEVKQALFRNVGFGGKCL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr947g00006 327 Gene3D - 142 203 IPR036638 GO:0046983
Mupr947g00006 327 MobiDBLite consensus disorder prediction 134 165 - -
Mupr947g00006 327 Pfam Helix-loop-helix DNA-binding domain 159 202 IPR011598 GO:0046983
Mupr947g00006 327 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 215 IPR036638 GO:0046983
Mupr947g00006 327 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Mupr947g00006 327 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 95 319 - -
Mupr947g00006 327 SMART finulus 159 208 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr947g00006 Mupr-Chr947 21114 22756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr947g00006 9 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 44.745 6.21e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr947g00006 HLH 6.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr947g00006 - - gmx:100790319 438.343