Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9466g00006 ACGACGATTCTTGTTGTGGAAAGAATCAAGAAATTGAAGAGAAAAGAAGAGGTGGGGTTGAGAAAGGATGAAATCGAGGTGGTATCATCATCGGTCTCCAAACCCACCGACCTGCCTCTTATCCTTGACGTCTTCACCGCCTCGGCTCACGGCGACTTTCCCAAATTGAGAACCTTCGTCGAACAAAACGGTGCCTCGGTTTCTGTTCCCGATGTTAGTGGCTATTACGCTCTTCAATGGGCGTCGCTTAACAACTTCCACGACATTGCGCACTATCTAATTCAGCATGGGGCGGATGTCAATGCTAAAGACAACATGCAACAAACGGCATTGCATTGGGCGGCGGTTCGTGGTTCAACTGCTGCTGCTGATGTGCTCGTGGAGAATGGTGCTCGGGTTGAAGCTGCAGACGTAAATGGATACCGGGCAGTTCATGTTGCTGCACAATATGGACAGACAGGTTTCTTAAATCGCCTTGTAGTAAAGTACCATGCTGATTTTGATGTGCCTGATAATGATGGAAGGACTCCTCTTCATTGGGCTGCATATAAGGGATATGCTGACACAATAAGATTGCTTCTATTTAGAGATGCAAGTCAAGGAAGACAAGATAAAGATGGTTGTACACCATTGCACTGGGCTGCGTTAAGAGGAAATGCAGAGGCATGTGCTGTGCTTGTACATGCAGGCACAAAGGACGAATTGATGGTGAAGGACAATGCTGGACACACACCTGTACAGCTTGCTTATGATAAAGGTCATCGGCATGTCGCTCCTTTTCTTTCAAATCAACAACGGGCTCGCAGCAACTACTGGAAGGGGAAACTTTGTAGTGGGATGGTGACAGATATTGGTTATGCTCCCATCTTATTGTGTATTATAATCTTTCAAATGATCCTCTTCATCAACTCAGTCATAGCAGCTCCAGACCTTAAAAAGATTACTGCTGTTGTTGGACTTTGGGCATGGACTGCGCTTTCTCTGTCAGCTGGTGCCCTGATTATGTTCTATAGGTGTAGTAGTAAAGATCCAGGTTATATAAAACGGCCCGGAGACTTGGGTACTGAAGGTGATACAGAGGATCCTTTATTGAATATTGATCTGAATAATTCTTCTGTTTGGATGGGAAATTGGTCTCAACTTTGCCCTACCTGCAAGATAATAAGACCTGTCAGATCTAAGCATTGCCCTACTTGTAAGAGATGCGTGGAACAGTTCGACCACCATTGTCCATGGATATCTAACTGCGTTGGGAAGAGGAACAAAAGGGATTTCTTTATTTTTATCTGCCTGGGAACTTTGACTTCTTCCCTTTCTGCTGTTATATCAGTTCAAAGTTTAGTTGTGTTTTTGGTGATGGATGCTGTGGTTCTTGTTGCGGCTATGACATTAACAATAACACAGGCTTCCATGATAGCTCGAAATGTGACGACAAATGAACTGGCAAATTCGTCCCGATATGATTATCTTCGGGGTCCTGATGGGCGGTTCAGAAACCCATATAACCACGGTTGTTGGAAGAACTGTACCGACTTCCTTTTTCTGGGCTATACAAATGACGATGATATTGCTTGGCCTCCATTACAGCAGGGTTTCTTCGTGAATGTACAAGATCCACAGTCTACAGCAGAAGATAAT 1638 0.4457 TTILVVERIKKLKRKEEVGLRKDEIEVVSSSVSKPTDLPLILDVFTASAHGDFPKLRTFVEQNGASVSVPDVSGYYALQWASLNNFHDIAHYLIQHGADVNAKDNMQQTALHWAAVRGSTAAADVLVENGARVEAADVNGYRAVHVAAQYGQTGFLNRLVVKYHADFDVPDNDGRTPLHWAAYKGYADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNAEACAVLVHAGTKDELMVKDNAGHTPVQLAYDKGHRHVAPFLSNQQRARSNYWKGKLCSGMVTDIGYAPILLCIIIFQMILFINSVIAAPDLKKITAVVGLWAWTALSLSAGALIMFYRCSSKDPGYIKRPGDLGTEGDTEDPLLNIDLNNSSVWMGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFICLGTLTSSLSAVISVQSLVVFLVMDAVVLVAAMTLTITQASMIARNVTTNELANSSRYDYLRGPDGRFRNPYNHGCWKNCTDFLFLGYTNDDDIAWPPLQQGFFVNVQDPQSTAEDN 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9466g00006 546 SUPERFAMILY Ankyrin repeat 44 263 IPR036770 -
Mupr9466g00006 546 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 36 519 - -
Mupr9466g00006 546 Gene3D - 40 159 IPR036770 -
Mupr9466g00006 546 FunFam S-acyltransferase 29 159 - -
Mupr9466g00006 546 ProSiteProfiles Ankyrin repeat profile. 173 205 IPR002110 GO:0005515
Mupr9466g00006 546 ProSiteProfiles Ankyrin repeat profile. 106 138 IPR002110 GO:0005515
Mupr9466g00006 546 FunFam S-acyltransferase 160 268 - -
Mupr9466g00006 546 Pfam Ankyrin repeats (3 copies) 47 136 IPR002110 GO:0005515
Mupr9466g00006 546 Pfam Ankyrin repeats (3 copies) 204 263 IPR002110 GO:0005515
Mupr9466g00006 546 Pfam Ankyrin repeats (3 copies) 137 202 IPR002110 GO:0005515
Mupr9466g00006 546 ProSiteProfiles DHHC domain profile. 380 430 - -
Mupr9466g00006 546 ProSiteProfiles Ankyrin repeat region circular profile. 173 199 - -
Mupr9466g00006 546 ProSiteProfiles Ankyrin repeat region circular profile. 73 105 - -
Mupr9466g00006 546 Gene3D - 160 273 IPR036770 -
Mupr9466g00006 546 ProSiteProfiles Ankyrin repeat region circular profile. 106 137 - -
Mupr9466g00006 546 ProSiteProfiles Ankyrin repeat region circular profile. 206 230 - -
Mupr9466g00006 546 ProSiteProfiles Ankyrin repeat profile. 139 172 IPR002110 GO:0005515
Mupr9466g00006 546 ProSiteProfiles Ankyrin repeat profile. 206 238 IPR002110 GO:0005515
Mupr9466g00006 546 SMART ANK_2a 106 135 IPR002110 GO:0005515
Mupr9466g00006 546 SMART ANK_2a 206 235 IPR002110 GO:0005515
Mupr9466g00006 546 SMART ANK_2a 73 102 IPR002110 GO:0005515
Mupr9466g00006 546 SMART ANK_2a 139 169 IPR002110 GO:0005515
Mupr9466g00006 546 SMART ANK_2a 173 202 IPR002110 GO:0005515
Mupr9466g00006 546 SMART ANK_2a 241 271 IPR002110 GO:0005515
Mupr9466g00006 546 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515
Mupr9466g00006 546 Pfam DHHC palmitoyltransferase 380 449 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9466g00006 Mupr-Chr9466 31729 47123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9466g00006 37 221 Ion Channels AT2G25600 32.447 3.24e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9466g00006 K20032 - gmx:100798740 933.71