Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9466g00003 GGTCACACTATCCCCGAGATAATTTTTTCACCGCCACACGTGCTACTAGGGCATTGGCTAAAATCTTCTCAAGTCAATGTAAACTGTTGCATTTCACCCAAAATTGGGAAAGATATTACCTTGAGCTCTTTTGATTGCAGAATTGGTTCTCTTATGGAGATTTCATCCTTCAGAGGATTACCTGATATGAAGGAGCAGGAAATAATAGAGGATCCTACCTTTTTCCATCAGTGGCACTTGAGTTCTATAGAAGAGCCTAACTTACAGCCAATAGCTGCTACTTTTGGAGAGACTTTACAACATCATGCATTTACTTACCCAGACTTCAACCCCAAAACTTCCATGGAAACTGCACTAGATGACATTGAAAGATCCACAAAACATCACAAAAACATCATCAGCTGGAATCCCAGCAAAAGTGCTCAGACATCAGAGACACAATTTGTTTCTTTCCCAAATCCTTTTTCATTTGTGGATTCCAATCACATAAGTCCATTGGGGCTAGTGAAAGCCGAGGATGAGATGGTTTGTCCTATAATCAATAGCACAACTCCTCCTGACACTATCCCTCAAGGAAACTTGGGGAATCATAACTATGTCTTCAAGGCCTGCCAAGAGGCCAAAAAGATTGGGACACGTTCTAAACTTTCTCAACCTCAAGACCACATAATAGCTGAAAGGAAGCGGCGAGAGAAGCTCAGCCAGAGGTTCATTGCTTTATCTGCCCTTGTTCCCGGACTACAGAAGACGGACAAAGCTTCTGTTCTTGGAGATGCTATCAAATACTTGAAGCAATTGCAAGAGAAAGTAAGGGCTCTTGAGGAGGAAAAGAACATGAGGAAAAATGTGGAGTCTGTGGTAATTGTGAAGAAATCTCAACTATCCAATGATGTTAACAACTCTTCTTCAGAGTACGATGGTTCATTTGACGAGATACTGCCTGAAATTGAAGCAAGGTTTTGTGAGAGAAATGTCCTCATAAGAGTTCACTGTGAGAAGAGTAAAGGAGTTGTAGAAAAAACAATCCATGAAATTGAGAAACACCATCTGAAAGTCACCAATAGCAATACCATGACATTTGGGAGATGTGCCCTTGACATAACAATCATCGCTCAGATGGATGTGGAATTTTGCATGGGAGTGAAGGATCTTGTGAGAAACCTACGCTCAGCTTTTACATCTTTC 1185 0.4118 GHTIPEIIFSPPHVLLGHWLKSSQVNVNCCISPKIGKDITLSSFDCRIGSLMEISSFRGLPDMKEQEIIEDPTFFHQWHLSSIEEPNLQPIAATFGETLQHHAFTYPDFNPKTSMETALDDIERSTKHHKNIISWNPSKSAQTSETQFVSFPNPFSFVDSNHISPLGLVKAEDEMVCPIINSTTPPDTIPQGNLGNHNYVFKACQEAKKIGTRSKLSQPQDHIIAERKRREKLSQRFIALSALVPGLQKTDKASVLGDAIKYLKQLQEKVRALEEEKNMRKNVESVVIVKKSQLSNDVNNSSSEYDGSFDEILPEIEARFCERNVLIRVHCEKSKGVVEKTIHEIEKHHLKVTNSNTMTFGRCALDITIIAQMDVEFCMGVKDLVRNLRSAFTSF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9466g00003 395 PANTHER BHLH TRANSCRIPTION FACTOR 94 393 - -
Mupr9466g00003 395 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 217 266 IPR011598 GO:0046983
Mupr9466g00003 395 SMART finulus 223 272 IPR011598 GO:0046983
Mupr9466g00003 395 Pfam Helix-loop-helix DNA-binding domain 220 267 IPR011598 GO:0046983
Mupr9466g00003 395 CDD bHLH_AtNAI1_like 220 292 - -
Mupr9466g00003 395 Coils Coil 256 283 - -
Mupr9466g00003 395 Gene3D - 215 291 IPR036638 GO:0046983
Mupr9466g00003 395 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 221 282 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9466g00003 Mupr-Chr9466 16861 20642 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9466g00003 217 395 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 58.791 1.83e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr9466g00003 HLH 4.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9466g00003 - - vun:114179595 571.237