Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr945g00006 ATGAGTTTTCAGGACATCGAGGCTGGCCGGCCGTTCGGTGCGAGGCGCGGGATGATCAATGGCAAGCAAGACCCTACGCAAGCGGTGGCTGCCGGAATATTCCAGATCAACACCGCCGTGTCCACGTTCCAGAGACTCGTCAACACTCTCGGAACCCCCAAAGACACCCCCGAGCTCCGCGAGAAGCTCCACAAGACAAGACTACATATTGGGCAATTGGTGAAGGATACATCAGCTAAACTTAAGCAAGCTAGTGACATTGATCACCATGCTGATGTTAATGCAAGCAAGAAGATCGCAGATGCTAAACTTGCAAAAGATTTTCAGGCAGTGTTGAAAGAATTTCAGAAAGCACAACGTCTTGCAGCTGAGAGGGAAACAGCGTACACTCCTTTTGTTCCACAAGCAGTCCTTCCTTCAAGCTATACAGCTAGTGAAGTAGATGTTGGTTCTGATAAGTCACCAGAACAGCGTGCCCTACTTGTGGAATCAAGGAGGCAGGAGGTTTTATTCTTAGATAATGAGATTGCCTTCAATGAGGCTATCATTGAGGAAAGGGAGCAAGGCATTCAAGAAATACAGCAGCAAATTGGGGAAGTTAACGAGATCTTCAAAGATCTTGCTGTGCTTGTCCATGAGCAAGGAGCCATGATTGATGATATTGGCTCCAACATTGAGAACTCCCATGCAGCAACAGCACAAGCAAAGTCTCAACTTGCAAAAGCTTCAAAAACCCAAAGATCAAATTCGTCTTTGACATGCTTGCTTTTGGTGATATTTGGGATTGTGCTTCTCATCGTGATCATATTTATGTAA 816 0.4596 MSFQDIEAGRPFGARRGMINGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKQASDIDHHADVNASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTASEVDVGSDKSPEQRALLVESRRQEVLFLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIENSHAATAQAKSQLAKASKTQRSNSSLTCLLLVIFGIVLLIVIIFM 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr945g00006 271 CDD SynN 23 148 IPR006011 GO:0016020
Mupr945g00006 271 Gene3D - 174 271 - -
Mupr945g00006 271 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 180 242 IPR000727 -
Mupr945g00006 271 CDD SNARE_Qa 200 241 - -
Mupr945g00006 271 FunFam Syntaxin-22 like 20 133 - -
Mupr945g00006 271 Pfam Syntaxin-like protein 30 129 IPR006011 GO:0016020
Mupr945g00006 271 ProSitePatterns Syntaxin / epimorphin family signature. 186 225 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mupr945g00006 271 FunFam Syntaxin-22 like 173 271 - -
Mupr945g00006 271 SMART tSNARE_6 175 242 IPR000727 -
Mupr945g00006 271 Gene3D - 20 133 - -
Mupr945g00006 271 Pfam SNARE domain 217 268 IPR000727 -
Mupr945g00006 271 PANTHER SYNTAXIN 26 264 IPR045242 -
Mupr945g00006 271 SMART SynN_4 14 127 IPR006011 GO:0016020
Mupr945g00006 271 SUPERFAMILY t-snare proteins 23 235 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr945g00006 Mupr-Chr945 38042 42416 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr945g00006 1 261 SNARE and Associated Proteins AT5G46860 78.927 4.01e-149 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr945g00006 - - gmx:547656 432.565