Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9450g00001 ATGGAAAGTAGTGTGACATATGAGAATGATCTCAACCTCAAGGCAACAGAGCTTAGATTGGGCCTGCCAGGGACTGAGGAAAGTGAGGAAAAAGCAAAGCCTTCATGTGTTATTATTAGAACAAACAAAAGGCCATTGAATGAAAATTCTGAGGAGTGTGCCTCAAAGGGCTCTAATGCTCAACATGTGGAAACTGATGCAACCCCTCCTGCCAAGGCTAAGATAGTGGGGTGGCCACCAATAAGATCCTATAGGAAAAACAGCCTTCAGGAGAATGAGGGTGCTGGGATTTATGTGAAAGTCAGCATGGATGGAGCCCCTTACCTAAGAAAGATAGACTTGAGGGTCTATGGAGGCTACACACAACTCCTCAAAGCTCTAGAAAACATGTTCAAGTTGACCATAGGTGAGTACTCTGAAAAAGAAGGTTACAAGGGATCTGACTATGCACCTACATATGAAGACAAGGAGGGTGACTGGATGTTAGTTGGAGATGTTCCATGGGACATGTTTGTGACTTCTTGCAAAAGGCTAAGAATCATGAAAGGATCTGAGGCCAGGGGTTTGGGTTGTGAATACAGTGTAATATACCAACTGTACTATATCAGAGTTTTGGAATCATATCTAACATACCATCAGGGCTCTGTGGATGCCGGATTCTTGAAATGGAGTAGTCTTCGCTCCCATATAATGAAAGGGGTTGAGACAGTCTCAACCGAGTCAGAGTGCCGACTAGGTTTCAACAGCAGGACTAACGTGTTGAATAACACTCGGTGGATGTCTGTGAAT 789 0.4411 MESSVTYENDLNLKATELRLGLPGTEESEEKAKPSCVIIRTNKRPLNENSEECASKGSNAQHVETDATPPAKAKIVGWPPIRSYRKNSLQENEGAGIYVKVSMDGAPYLRKIDLRVYGGYTQLLKALENMFKLTIGEYSEKEGYKGSDYAPTYEDKEGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGLGCEYSVIYQLYYIRVLESYLTYHQGSVDAGFLKWSSLRSHIMKGVETVSTESECRLGFNSRTNVLNNTRWMSVN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9450g00001 263 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 187 IPR003311 GO:0005634|GO:0006355
Mupr9450g00001 263 SUPERFAMILY CAD & PB1 domains 86 182 - -
Mupr9450g00001 263 Gene3D - 90 195 - -
Mupr9450g00001 263 FunFam Auxin-responsive protein 91 193 - -
Mupr9450g00001 263 Pfam AUX/IAA family 16 190 IPR033389 -
Mupr9450g00001 263 ProSiteProfiles PB1 domain profile. 96 183 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9450g00001 Mupr-Chr9450 8557 11467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9450g00001 99 189 B3 DNA Binding Superfamily AT2G46530 38.462 1.01e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr9450g00001 AUX_IAA 1.1e-52 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9450g00001 K14484 - gmx:100527777 322.398