Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9437g00007 ATGAGCCGCTACGACAGCCGCTCTGGCGACCCCACTTCCTACCGCGACCGAAGAAGTGATTCCGGGCTGGGCGCACCTTCAGCCACAGCCTACGGTGGTTCAAGCAGAAGAGACTCCGACAATGGTTCGCCTCGTAAACTGAATTTGGATGGATTGCCTCATTTTGAGAAAAACTTCTACAACGAATCATCTTCCGTTAGGGCAATGACCGAGGCCGAGGTTAACGACTACCGTCAACGCCGTGAAATCACCGTCGAAGGCCGTGACGTCCCCAAACCCGTTAAGACCTTTCACGACATCGGTTTTCCAGAATATGTAATGCAAGAAATTAAGAAAGCTGGCTTTGTTGAACCTACACCTATCCAGTCCCAAGGTTGGCCCATGGCTTTGAAGGGACGTGATCTTATAGGAATTGCGGAAACAGGATCGGGGAAGACGCTTGCTTACTTGTTACCTGCCATTGTGCATGTTAATGCACAGCCAATTCTAGATCCTGGAGATGGACCAATTGTGTTAGTTTTGGCCCCTACACGTGAGCTTGCCGTTCAGATACAACAAGAGGCGACTAAATTTGGTGCATCGTCGAGGATTAAGAGTACGTGCATATATGGTGGGGTTCCGAAAGGGCCTCAGGTGCGTGATCTCCAGAAAGGCGTTGAAATTATAATTGCCACTCCGGGAAGGTTGATTGATATGCTTGAGTCGAATCATACTAACTTGCGGAGGGTTACGTACCTAGTATTGGATGAAGCTGATAGGATGCTGGACATGGGGTTTGATCCTCAGATACGGAAGATTGTCTCTCAGATTCGTCCAGATCGTCAAACATTATACTGGAGTGCCACCTGGCCAAAGGAGGTTGAACAATTGGCAAGGCAGTTCCTTTATAACCCATACAAAGTAATTATAGGTTCTGCAGATTTAAAAGCTAACCATGCTATAAAGCAATATGTTGACATTGTTCCTGAAAAGCAGAAATATGATAAATTGGTGAAGTTGCTGGAGGATATCATGGATGGCAGCCGAATACTGATATTCATGGATACTAAGAAAGGATGTGATCAGATTACTAGGCAGCTCCGCATGGATGGTTGGCCCACACTTTCAATTCATGGAGATAAAAGTCAAGCAGAAAGAGATTGGGTGCTCTCAGAGTTTAAATCTGGAAAGAGCCCTATAATGACTGCAACAGATGTTGCAGCTCGTGGTTTAGATGTAAAGGATGTGAAGTATGTGATAAATTATGACTTCCCGGGATCACTTGAGGATTATGTTCATCGCATTGGTCGGACAGGGAGAGCTGGTGCAAAAGGGACTGCATACACATTTTTCACAGCTGCTAATGCCAGATTTGCGAAGGAACTTATAACCATACTTGAGGAAGCTGGACAGAGAGTGAGTCCTGAATTGGCAGCAATGGGGCGCGGTGCTCCTCCTCCACCTTCAGGAGGATTCCGAGACCGTGGGAAGGGTTATGGCAGTGGTCGGCCATGGAGCTGA 1500 0.4707 MSRYDSRSGDPTSYRDRRSDSGLGAPSATAYGGSSRRDSDNGSPRKLNLDGLPHFEKNFYNESSSVRAMTEAEVNDYRQRREITVEGRDVPKPVKTFHDIGFPEYVMQEIKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPTLSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQRVSPELAAMGRGAPPPPSGGFRDRGKGYGSGRPWS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9437g00007 499 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 126 301 IPR014001 -
Mupr9437g00007 499 Pfam Helicase conserved C-terminal domain 326 435 IPR001650 -
Mupr9437g00007 499 Pfam DEAD/DEAH box helicase 119 290 IPR011545 GO:0003676|GO:0005524
Mupr9437g00007 499 Gene3D - 57 305 IPR027417 -
Mupr9437g00007 499 MobiDBLite consensus disorder prediction 1 52 - -
Mupr9437g00007 499 FunFam ATP-dependent RNA helicase RhlB 305 477 - -
Mupr9437g00007 499 MobiDBLite consensus disorder prediction 1 17 - -
Mupr9437g00007 499 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 247 255 IPR000629 -
Mupr9437g00007 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 451 IPR027417 -
Mupr9437g00007 499 SMART ultradead3 114 317 IPR014001 -
Mupr9437g00007 499 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 95 123 IPR014014 GO:0003724
Mupr9437g00007 499 CDD SF2_C_DEAD 314 444 - -
Mupr9437g00007 499 SMART helicmild6 354 435 IPR001650 -
Mupr9437g00007 499 MobiDBLite consensus disorder prediction 470 499 - -
Mupr9437g00007 499 Gene3D - 307 472 IPR027417 -
Mupr9437g00007 499 CDD DEADc_DDX5_DDX17 106 301 - -
Mupr9437g00007 499 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 72 473 - -
Mupr9437g00007 499 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 329 474 IPR001650 -
Mupr9437g00007 499 FunFam probable ATP-dependent RNA helicase DDX17 57 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9437g00007 Mupr-Chr9437 62613 67558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9437g00007 82 455 Eukaryotic Initiation Factors Gene Family AT3G19760 33.867 2.99e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9437g00007 K12823 - gmx:100790464 911.753