Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9437g00002 ATGGACGGCGAAGCGGACCCTCCTCAAAACCCTACCATAAGACACAAATGCCCGGCATGCTATAAGCAATTTAAGAAGAAAGAGCATCTTATTGAGCATATGAAAACCTCCTACCACTCTGTCCATCAACCTAGATGTGGGGTCTGTCAAAAGCACTGCAAATCTTTTGAGTCTCTGAGGGAACATCTTATTGGTCCTTTGCCGAAAGGAGTTTGTTCAAAGATTTTCTCTCAACAGGGCTGTCAACTTTGCTTGGCTCTATTTGGAAGTCCCGGGTCTCTCGTTGGTCATAGACTAACATGTCACCTATCTGCCCCTACACGTCTAGGAACAACTGTATTGCCCCATATTGATTCCCAATTTGATCGTCTAGATTCTTCTGATGAAAACCATGCTGGCAGGTGCCCTGGAGCAGTTGCAATAGACTGTGAAATGGTTGGTGGTGGAAGTGATGGTTCACTGGAACTTTGTGCTAGAGTATGCTTGGTGGATGAATATGAGAACTTAATCTTCCATACATATGTACAGCCTGAAATACCTGTTACTAATTACAGATATGATATAACTGGATTAACCGAAGACCATCTCAGAGATGCCATGCCACTTAAGGAAGTTCGAGAAAAGGTATTGCAAATTTTATACAATGGAGAATCCATTGGCAAAGTTAGACTGGATGGTGGAAAGGCCAGGCTTCTTGTGGGGCATGACTTAGCACACGATTTAGATTGCTTGAAAATGAGTTATCCTGATCATATGCTGAGAGACACTGCGAAGTACTATCCATTGATGAAAACAAACTTGGTCAGCCATTCGCTCAAGTATCTTACCCGAACATATCTAGGTTATGATATACAATCCGGCATTCATGACCCATATGAAGATTGTATTTCTGTGATGAGACTATACAAGAGAATACGAGGCCAAATTCATGCGGAGGAAGGCCATGGAACATTGACTCCGAGTAACAACATTGTTGGCATGCCTGATAGTTTGAGATCCTCCAACTCCAAGGTACTTGAAAACCTCACACCAGATCAACTCTATGCCATTTCAAGATCAGACTATAAGTGTTGGTGCTTGGATTTGAGGCCAAGATTGGCAGCCTGA 1107 0.4291 MDGEADPPQNPTIRHKCPACYKQFKKKEHLIEHMKTSYHSVHQPRCGVCQKHCKSFESLREHLIGPLPKGVCSKIFSQQGCQLCLALFGSPGSLVGHRLTCHLSAPTRLGTTVLPHIDSQFDRLDSSDENHAGRCPGAVAIDCEMVGGGSDGSLELCARVCLVDEYENLIFHTYVQPEIPVTNYRYDITGLTEDHLRDAMPLKEVREKVLQILYNGESIGKVRLDGGKARLLVGHDLAHDLDCLKMSYPDHMLRDTAKYYPLMKTNLVSHSLKYLTRTYLGYDIQSGIHDPYEDCISVMRLYKRIRGQIHAEEGHGTLTPSNNIVGMPDSLRSSNSKVLENLTPDQLYAISRSDYKCWCLDLRPRLAA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9437g00002 368 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 17 311 IPR047021 GO:0004527
Mupr9437g00002 368 SMART exoiiiendus 137 311 IPR013520 -
Mupr9437g00002 368 SUPERFAMILY Ribonuclease H-like 139 306 IPR012337 -
Mupr9437g00002 368 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Mupr9437g00002 368 Gene3D - 136 315 IPR036397 GO:0003676
Mupr9437g00002 368 Gene3D Classic Zinc Finger 4 65 - -
Mupr9437g00002 368 CDD REX4_like 139 303 IPR037431 GO:0006364|GO:0008408
Mupr9437g00002 368 SMART c2h2final6 79 102 IPR013087 -
Mupr9437g00002 368 SMART c2h2final6 44 64 IPR013087 -
Mupr9437g00002 368 SMART c2h2final6 15 39 IPR013087 -
Mupr9437g00002 368 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Mupr9437g00002 368 Pfam Exonuclease 139 302 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9437g00002 Mupr-Chr9437 25091 27720 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9437g00002 1 361 C2H2 Transcription Factor Family AT3G27970 53.186 4.47e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9437g00002 K18327 - gmx:100788682 657.136