Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr941g00001 ATGGAGAAAGAGGTTGCGGAAAACCTTTGGAATGGTAACACAGAAACGCAAATTCAAGCAGCTGTGGAACTCAGGAAATTCAGCAGAAAGCAGAGGCACAATTTGGCAGAAAGTGGAATTATGGTACCTCTAATTTCCATGCTTCATTATCAAAACTATGAAGCCATTGAAGCTGCTCTGTGTGCTCTACTTAGCCTTGCCTTTGGAAGTGAAAGAAACAAGTCTGGGATCATCAAGTCAGGAGCTTTGCCTGTGTTGCTGAGTCTCTTCCATTGCCAAAGCCAGACAGTGGTAGAATTGACAATAGCCACATTGCTAACCATCTCTTCTTGCAACTCAAACAAGGTAGCAATTGCTTCCTCTGGGGCCATCCAACTCTTAGCTCAATTTCTCAATAGCAATGGCAGCACTCAGTCCCAGCTGGACACTATAGCTACCCTTCACAACCTCTCAACCTGCCAAGAGACTATTATTCCATTCATTGTCTCTTCTGGGGTCATACTCTCCTTGCTTGAACTTATCCACAGATCAGAAAAATCATCCACATTGGTTGAGAAAGCAATTGGGTTGCTAGAACACATTGTGTCTTCATCAAATAGTGCACTTTGTGAGACTGCTAGTATTGGGGGAGCAGTTAGGACACTGGTGGAGACCATTGAAGATGGGTCATTTCAAAGCAAAGAGCATGCAGTAGGGACACTCCTCCTTTTATGCCAAAGCTGCAGAGAAAAATATAGAGGAATGATCTTGAGGGAGGGAGTGATGCCAGGGTTGCTTCAGTTGAGTGTGGATGGAACTTGGAGAGCCAAAAATTTGGCCAAGAAATTGTTGCTGCTTCTGAGGGATTGCTCCAATTATAGTTCAACAAGTAAACAAATTAATCATGGGGTTATAGAACGGATCATGGAGGAAATTGATGATGCAGAAGGAGAGGAATTGGCTGAGACTACGTTGAGATTGGTAGAGGAAATGGTTGCAAAACTTAGCCAGACATTGCTTTACACATCACTTGTCGCTTGCCAAAACCGAATGGCAATATATTAA 1044 0.433 MEKEVAENLWNGNTETQIQAAVELRKFSRKQRHNLAESGIMVPLISMLHYQNYEAIEAALCALLSLAFGSERNKSGIIKSGALPVLLSLFHCQSQTVVELTIATLLTISSCNSNKVAIASSGAIQLLAQFLNSNGSTQSQLDTIATLHNLSTCQETIIPFIVSSGVILSLLELIHRSEKSSTLVEKAIGLLEHIVSSSNSALCETASIGGAVRTLVETIEDGSFQSKEHAVGTLLLLCQSCREKYRGMILREGVMPGLLQLSVDGTWRAKNLAKKLLLLLRDCSNYSSTSKQINHGVIERIMEEIDDAEGEELAETTLRLVEEMVAKLSQTLLYTSLVACQNRMAIY 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr941g00001 347 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 165 194 IPR000225 GO:0005515
Mupr941g00001 347 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Mupr941g00001 347 PANTHER U BOX DOMAIN-CONTAINING 7 283 - -
Mupr941g00001 347 SUPERFAMILY ARM repeat 5 311 IPR016024 -
Mupr941g00001 347 Gene3D - 204 321 IPR011989 -
Mupr941g00001 347 FunFam U-box domain-containing protein 4 202 319 - -
Mupr941g00001 347 Gene3D - 3 203 IPR011989 -
Mupr941g00001 347 SMART arm_5 153 196 IPR000225 GO:0005515
Mupr941g00001 347 SMART arm_5 70 110 IPR000225 GO:0005515
Mupr941g00001 347 SMART arm_5 111 152 IPR000225 GO:0005515
Mupr941g00001 347 SMART arm_5 28 68 IPR000225 GO:0005515
Mupr941g00001 347 SMART arm_5 199 239 IPR000225 GO:0005515
Mupr941g00001 347 FunFam U-box domain-containing protein 4 3 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr941g00001 Mupr-Chr941 4024 6067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr941g00001 3 282 U-box Gene Family AT2G23140 32.281 3.41e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr941g00001 - - gmx:100811007 554.673