Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9408g00001 ATGGCTTCCAACACCATCATCCAACGCACCTCTTCTTCATCTCACGTTGTAAGGACATATGACGTGTTTGTGAGCTTCTGCGGCAGAGACACACGCAACAATTTTACTGCTTTTCTCTTTGAAGCTCTTCGTAGAAATGGCATTGATGCCTTCAAAGATGGTCAAGATCTCAAGAAAGGCGAATCCATAGCACCCGAGCTTCTACAAGCCATTCAAGGCTCTCGCGTTTTGGTTGTTGTCTTCTCAAAGAACTATGCTTCCTCCACTTGGTGCTTGCGTGAACTAGCACACATATGCAATTGCATTATTACATCATCGACACACGTTCTGCCTATTTTTTATGATGTTGATCCATCTGAGGTGCGAAAACAAAGTGGATATTTTGAGAAAGCGTTTGCCCAACACGAAGAAAGATTCAAAGAGGATAAAGAGAAGATGGAGGAAGTGCAAAGATGGAGAGAAGCTCTCACACAAGTGGCCAATATCTCTGGTTGGGATATCCAAAATAAGGCACAAGATGCAGAGATTGAACAAATTGTTCTAAAATTAATTAATATATTGGGTCCCAAATTTTTAAGTCTTCCAAATGATGATCTAGTTGGGATGCAATCTCGTTTTGAAGAATTAGCAAAGCTTTTACATTTGGGGTCAATTAATGATGTTCGAGTTGTCGGAATTAGCGGGATGAGTGGAATAGGAAAGTCAACTGTTGTTGGTTCTTTATTTGAAAGAATCTCTCATCAATATGATTTTCGTTGTTTTATTGATGATGTAAGTAAAATTTATCGAGATTCTGGTGCATTAGGCATATTAAAACAGTTACTTTCTCAGTGTCTAAATGAAAAAGATTTGAAGATTTGCAATGTTTATGAGGGAACACGTCTGGTATGGAATAGACTACGCAATGCAAGGGCTCTTATAGTTCTTGATAATGTTGATCAAGTTGGACAACTAAAGATGTTTACAGGGAATAGAGAGACTTTATTACGTGAATGCCTTGGCGGAGGGAGCAGAATCATCATAACTTCTAGGGATCAACATATATTGAGGATACATGGAGTTGATGAACTTTACCAGGTCCAACCGTTGAATAAGGAAGATGCTGTTGAGTTGTTTTGCAGAAATGCTTTCAAAGACTTGACAAACGATGTATTGTCACATGCTCAAGGTCATCCCTTGGCAATTCAAGTATTGGGCTCATCTTTGTTAGGCCAAAATGTCTCACAGTGGAGAAGTGCATTGGCTAGGCTAAGAAAAACTAAAAGTAAAAATATTATGGATGTGCTGCGAATAGGTTTTGATGAGCTTGAAGACATGGAGAAGGAAATATTTCTAGATATTGCTTGCTTTTTCAATTCTCCCAGTAATGAGCAATCAGTGAAGGAAGTTCTAGATTTTCGTGGATTTCATCCTGAATATGGCCTACAAGTTCTCGCTGCAAAATCGCTCATCAGTATTTGCTCTGGATACATTTTTATGCATGGCTTATTGAAAGATTTGGGCTGGTTTATTGTTCGAGAAAAATCACCTATGAAGCCAAGAAAGTGGAGTAGGTTGTGGGATTGCCAAGATTTCCTCAAAGTTATGTCAGACAATGTGGAAGCAGAAAATCTTGAAGCCATAGCTGTTCAACAGGATGAGATGGAGTTTCGTGAAACAACAATAAAGGTAGATGCTTTATCAAAAATGAGTCACCTGAAGTTGCTCAAGCTTTCGAATTTGAACTTTTCCGGAAGCCTCAATCATCTTTCCAATGAGTTAGGATATCTTACTTGGAATAATTATCCTTTTGAGTGTTTGCCTCCAAGTTTTCAGCCAAACAAACTTGTTCAGTTGTCCCTGGTTGACAGCAACATCAAACAACTATGGAAAGACACAATGGTA 1884 0.3875 MASNTIIQRTSSSSHVVRTYDVFVSFCGRDTRNNFTAFLFEALRRNGIDAFKDGQDLKKGESIAPELLQAIQGSRVLVVVFSKNYASSTWCLRELAHICNCIITSSTHVLPIFYDVDPSEVRKQSGYFEKAFAQHEERFKEDKEKMEEVQRWREALTQVANISGWDIQNKAQDAEIEQIVLKLINILGPKFLSLPNDDLVGMQSRFEELAKLLHLGSINDVRVVGISGMSGIGKSTVVGSLFERISHQYDFRCFIDDVSKIYRDSGALGILKQLLSQCLNEKDLKICNVYEGTRLVWNRLRNARALIVLDNVDQVGQLKMFTGNRETLLRECLGGGSRIIITSRDQHILRIHGVDELYQVQPLNKEDAVELFCRNAFKDLTNDVLSHAQGHPLAIQVLGSSLLGQNVSQWRSALARLRKTKSKNIMDVLRIGFDELEDMEKEIFLDIACFFNSPSNEQSVKEVLDFRGFHPEYGLQVLAAKSLISICSGYIFMHGLLKDLGWFIVREKSPMKPRKWSRLWDCQDFLKVMSDNVEAENLEAIAVQQDEMEFRETTIKVDALSKMSHLKLLKLSNLNFSGSLNHLSNELGYLTWNNYPFECLPPSFQPNKLVQLSLVDSNIKQLWKDTMV 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9408g00001 628 Pfam TIR domain 20 170 IPR000157 GO:0007165
Mupr9408g00001 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 447 IPR027417 -
Mupr9408g00001 628 Gene3D - 193 355 IPR027417 -
Mupr9408g00001 628 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 188 - -
Mupr9408g00001 628 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 622 IPR044974 GO:0006952
Mupr9408g00001 628 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
Mupr9408g00001 628 Gene3D - 362 437 IPR042197 -
Mupr9408g00001 628 SUPERFAMILY "Winged helix" DNA-binding domain 424 528 IPR036390 -
Mupr9408g00001 628 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 165 IPR035897 -
Mupr9408g00001 628 Gene3D Ribonuclease Inhibitor 523 628 IPR032675 -
Mupr9408g00001 628 Gene3D - 17 189 IPR035897 -
Mupr9408g00001 628 PRINTS Disease resistance protein signature 299 313 - -
Mupr9408g00001 628 PRINTS Disease resistance protein signature 223 238 - -
Mupr9408g00001 628 PRINTS Disease resistance protein signature 561 577 - -
Mupr9408g00001 628 PRINTS Disease resistance protein signature 388 402 - -
Mupr9408g00001 628 Pfam NB-ARC domain 218 423 IPR002182 GO:0043531
Mupr9408g00001 628 SMART till_3 19 162 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9408g00001 Mupr-Chr9408 269 2462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9408g00001 200 626 WRKY Transcription Factor Family AT5G45050 32.533 2.56e-62 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9408g00001 - - gmx:100814717 817.379