Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9406g00001 ATGAAGGGGAGCAGATCAGAAGACAAAAGATACGTCCTGAGAAAGAATTTCCTCAAATATGTTAATGTCAGGGGGTTTGCTCCAGAATCTGAGTTTCACGATGGTTGTCATTCCTTCATCTTACCTAATGTCTTCTGCAAAGACTTGGACTTGTGCGGTGAATCTGTTGTATTAACTGAGGAGTGGTGTTGTGCGGTGCCACCGTGCGGTGATGGAAAATACTCTTCTTTAGATAAATGCCATACACGTCACTGGCACCACCAGTTTTTGATGGTGAAGGTTATCATGTTTGGCCAACAAGGTTATCATGTGAAGGCTAGCTCGAGTTATGGGGGTAAAGGAAAACAATTTGAAAGTTATAAGGACAATTTTGATATCTCTCATTGTAAACATTATGGAAGAAAAAATCATCCATCTTCAAAGTGTTGGAGGAAGCTAGACCAGAAATGTGAAAAATGCTTGAAGATGGGGCATCATCAAAGAATTTGCAAAAGCAACAATCAGCAAAAGACAGTCACACAAGAGAATGTGCAACAAAAGAACATTGGTCAAGTTGTTGATGAAGAAAAGGAGCAGACTTTGATACTTCGTGACCTCTTTAAGGAATTGGGTACTTCTGTAGTTTTCAAAGTGAATAGTGGAAATGGAGAACACAATGCAGTCAAAGGAAAAGACACAGTAGCAATTGAAAGTATTTCAAGTACAAAACTTATCAAAGATGTGTTATTTGTACCTAACATCGGTCAAAATTTGTTGAGTGTTGGTCAGTTGATTCAAAAAGGTTTCAAAGTTATCTTTGAAAGTGATAAGTGTTTGATCAAAGATGCAAATGACATCAAGGTATTCAAAGTAAAAATGAAAGGAAAAAACTTTGCGCTTGATCCAATGAAGGAAGAGCAAACAACATTCTCTGCAATAAATGTCCACGTTGAAGTTTGGCACAAGAGGCTTGGACACTTCAACCATACAGTTGTTGTGAATTTGCAAAGAATGGAATTGGTTCAAGGTCTCCCCTGTCTTGAATTTAAAATTCCAAACTGTAGAGCTTGTCAACAAGGAAAGCAATCAAGACTTCCATTCAAGCAATCAACTTGGAGAGCTACTAAGAAGCTGCAATTGATACACACGGATGTGGCTGGACCTCACAACAATCCATCTCTCAATGGTAACAGAATGTGTTGGATATATTTTCTTAAATTCAAGTCAGAAGTTGTTGGTGTTTTTTGGCAATTCAAGCAATGGATTGAAACACAAAGTGGTCATAAAATACAAGCATTGAGATCTGACAACGGCAAGGAGTACACCTCCAATCAATTTTATTATTTTTGTAAAGAAGCAAGGATTGAACATCAACTCACTGCACCATACACTCCACAACAAAATGGAGTGAGCGTGAGAAAGAACTACACTATTATGGATGATGGC 1425 0.3804 MKGSRSEDKRYVLRKNFLKYVNVRGFAPESEFHDGCHSFILPNVFCKDLDLCGESVVLTEEWCCAVPPCGDGKYSSLDKCHTRHWHHQFLMVKVIMFGQQGYHVKASSSYGGKGKQFESYKDNFDISHCKHYGRKNHPSSKCWRKLDQKCEKCLKMGHHQRICKSNNQQKTVTQENVQQKNIGQVVDEEKEQTLILRDLFKELGTSVVFKVNSGNGEHNAVKGKDTVAIESISSTKLIKDVLFVPNIGQNLLSVGQLIQKGFKVIFESDKCLIKDANDIKVFKVKMKGKNFALDPMKEEQTTFSAINVHVEVWHKRLGHFNHTVVVNLQRMELVQGLPCLEFKIPNCRACQQGKQSRLPFKQSTWRATKKLQLIHTDVAGPHNNPSLNGNRMCWIYFLKFKSEVVGVFWQFKQWIETQSGHKIQALRSDNGKEYTSNQFYYFCKEARIEHQLTAPYTPQQNGVSVRKNYTIMDDG 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9406g00001 475 Gene3D - 362 474 IPR036397 GO:0003676
Mupr9406g00001 475 PANTHER TRANSPOSASE, PUTATIVE-RELATED 255 473 - -
Mupr9406g00001 475 SUPERFAMILY Ribonuclease H-like 364 473 IPR012337 -
Mupr9406g00001 475 SUPERFAMILY Retrovirus zinc finger-like domains 118 167 IPR036875 GO:0003676|GO:0008270
Mupr9406g00001 475 ProSiteProfiles Integrase catalytic domain profile. 355 475 IPR001584 GO:0015074
Mupr9406g00001 475 Pfam Integrase core domain 390 458 IPR001584 GO:0015074
Mupr9406g00001 475 Pfam GAG-pre-integrase domain 294 355 IPR025724 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9406g00001 Mupr-Chr9406 70 2489 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9406g00001 12 69 Core DNA Replication Machinery Family AT2G27120 52.308 2.55e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9406g00001 - - zju:107410479 380.563