Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9403g00001 ATGAGAAAGCGCCAAGTAGTTGTGAGAAGAGAGGAGCCTCAGAGAAGCGTTAGGAGTGTGAAATATGGCGAGTGCCAGAAGAATCACGCGGCGAATGTTGGAGGGTATGCTGTTGATGGTTGCAGGGAGTTCATGGCCAGTGGTGGAGAAGGAACAAGTGCTGCTCTCACTTGTGCTGCATGTGGCTGCCACAGGAACTTCCACAAGAGACAGGTTGAAACTGAAGTAGTAGTAACGTATATGTATGTATGTGATTTTGAGGTTGATGTGTCTAAAGAGAAAAGGAAGGCAATTAATCACAATTCACAAGCTGGTTTGGTGATGAGCGAAAGTTTTGATCATCTTCTCTTCTTACATCAATGA 363 0.449 MRKRQVVVRREEPQRSVRSVKYGECQKNHAANVGGYAVDGCREFMASGGEGTSAALTCAACGCHRNFHKRQVETEVVVTYMYVCDFEVDVSKEKRKAINHNSQAGLVMSESFDHLLFLHQ 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9403g00001 120 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 16 94 - -
Mupr9403g00001 120 Pfam ZF-HD protein dimerisation region 20 72 IPR006456 -
Mupr9403g00001 120 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 21 71 IPR006456 -
Mupr9403g00001 120 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 71 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9403g00001 Mupr-Chr9403 36846 38086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9403g00001 1 77 Zinc finger-homeobox gene family AT3G28917 69.663 1.40e-35 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mupr9403g00001 ZF-HD_dimer 1.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9403g00001 - - aprc:113868039 140.198