Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr93g00001 CCTGAGCTGCACTCTGGATATCAAACTGGAGAGAACCCTAGAAATCAAATTCTCCCTCACCACTCTGCCTCCATAACCGAGAACGCCGTGGTAGTTACAGTCATGGCGGACGTGATGATCATGAAAGAGATCGAAGACACGGCGCTGCGTCTCGGCGTCGATTTTTCCACTCTCGATCTCGATGCCATTCGCCTCCCGCCAGGAGAAAATTGCGGCATCGACAGCGATGACGAGGAAATTTACCAGGAGGATAACCTCGAGTACGAGTCTGGATTTGGCAACATCATAGTCGTGGATAACCTCCCCGTGGTTCCGAGAGAGAAGTTCGACAAGCTAGAAGGAGTGGTTCGCAAAATTTATAGTCAGATTGGTGTCATTAAGGATGACGGCCTCTGGATGCCGGTTGACCCTGAAACTGAGAAAACCCTAGGTTACTGCTTCATTGAGTATAATACCCCTCAGGAAGCGGAGCTTGCAAAAGAGAAGACTCATGGCTACAAATTGGACCGTGCACACATATTTTCTGTGAGCATGTTTGATGACTTTGACAGGTTCATGAAAGTTCCATATGAGTGGGCTCCTCCTGAAACTAAGCCATATGCTCCAGGGGAAAATCTTCAACATTGGCTCACTGATGCAAAGGCCAGGGACCAGTTTGTGATTCGTGCTGGTTCAGATACCGAGGTTTTGTGGAATGATGCGAGGCATTTAAAGCCTGATCCAGTTTATAAGCGTGCATTTTGGACCGAGAGTTTTGTACAATGGTCTCCTCTGGGGACATACTTGGCCACTGTTCACAGACAAGGAGCTGCAGTCTGGGGAGGTGCTTCAAGCTTTAATAGACTTATGCGTTATGCACATCCTCAGGTAAAGCTTATTGATTTTTCACCTGGTGAGAAGTATTTGGTAACTTATAGCAGCCATGAACCAAGCAACCCTCGTGATGCTAATAGGGTTGTGATAAATATATTTGATGTGAGGACTGGTAAGGTGATGAGGGATTTTAAAGGAAGTGCTGATGATTTTGCAGTTGGAGGTGCTGGGGGTGTTACTGGGGTGTCATGGCCTGTTTTCAAATGGAGTGGTGGAAGAGATGATAAATACTTTGCAAGGATGGGGAAGAATATACTCTCTGTATATGAGACAGAGACCTTTTCTCTTGTTGATAAGAAGTCCTTAAAGGTTGAAAGTATAATGGATTTCAGCTGGTCTCCGACTGATCCAATTATTGCTCTGTTTGTTCCTGAGATGGGAGGTGGTAACCAGCCTGCTAGAGTAAGCCTGATTCAAATCCCCAGCAAAGAGGAACTCAGGCAAAAGAACCTTTTCAGTGTCAGTGACTGCAAGATGTATTGGCAAAGCAATGGAGACTACCTTGCTGTTAATGTGGATAGGTACACAAAAACAAAAAAAAGCACCTACACAGGCTTTGAACTTTTCCGTATCAAAGAACGGGATATACCAATTGAAGTTTTGGAGCTTGAGAATAAGAATGACAAGATCATTGCCTTTGCTTGGGAGCCAAAAGGACACAGGTTTGTGGTTATTCATGGTGATAACCCTAAGCCTGATGTTAGCATTTACTCCATGCGGACAGCTCAGAACACTGGCCGAGTTTCAAAACTCACTACTCTGAAAGGCAAGCAAGCAAATGCTCTGTTTTGGTCACCTGCAGGTCGCTACATTGTACTAGCTGGGTTGAAAGGCTTCAATGGACAATTGGAATTTTACAATGTTGATGAACTTGAAACCATGGCTACTGCCGAGCATTTTATGGCAACAGATATTGAATGGGATCCAACTGGAAGGTATGTTGCAACTGCTGTGACTTCAGTTCATGAAATGGAAAATGGTTTCAATATATGGTCATTCAATGGCAAGCATCTGTATCGGATTCTGAAGGATCACTTCTTTCAGTTCTTATGGCGACCAAGGCCACCATCTTTCTTGAGTCCCGAGAAAGAGGAAGAGATTGCCAAGAACTTGAAAAAGTATAGTAAGAAATATGAGGCAGAAGATCAAGATGTTTCGCTGCTGCTGAGTGAGCAGGAGCGTGAGAAGCGTAGGATGCTGAAAGAAGAGTGGGAAAAATGGGTTAATGAATGGAAGCTTTTGCACGAAGATGAGAGTTTACAGAGGCAAAAGCTTAGGGATGGAGAAGCCAGTGACGAAGAGGAGGAATACGAGGCAAAGGACATCGAAGTGGAGGAAGTGATCAATGTAACAGAAGAGGTCCTTCACCTCGAGTATGACCAAGAGTGA 2262 0.4483 PELHSGYQTGENPRNQILPHHSASITENAVVVTVMADVMIMKEIEDTALRLGVDFSTLDLDAIRLPPGENCGIDSDDEEIYQEDNLEYESGFGNIIVVDNLPVVPREKFDKLEGVVRKIYSQIGVIKDDGLWMPVDPETEKTLGYCFIEYNTPQEAELAKEKTHGYKLDRAHIFSVSMFDDFDRFMKVPYEWAPPETKPYAPGENLQHWLTDAKARDQFVIRAGSDTEVLWNDARHLKPDPVYKRAFWTESFVQWSPLGTYLATVHRQGAAVWGGASSFNRLMRYAHPQVKLIDFSPGEKYLVTYSSHEPSNPRDANRVVINIFDVRTGKVMRDFKGSADDFAVGGAGGVTGVSWPVFKWSGGRDDKYFARMGKNILSVYETETFSLVDKKSLKVESIMDFSWSPTDPIIALFVPEMGGGNQPARVSLIQIPSKEELRQKNLFSVSDCKMYWQSNGDYLAVNVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFVVIHGDNPKPDVSIYSMRTAQNTGRVSKLTTLKGKQANALFWSPAGRYIVLAGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQEREKRRMLKEEWEKWVNEWKLLHEDESLQRQKLRDGEASDEEEEYEAKDIEVEEVINVTEEVLHLEYDQE 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr93g00001 753 Gene3D - 444 651 IPR015943 GO:0005515
Mupr93g00001 753 SMART rrm1_1 95 177 IPR000504 GO:0003723
Mupr93g00001 753 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 94 181 IPR000504 GO:0003723
Mupr93g00001 753 Gene3D - 89 188 IPR012677 -
Mupr93g00001 753 Pfam Eukaryotic translation initiation factor eIF2A 440 640 IPR013979 -
Mupr93g00001 753 SUPERFAMILY RNA-binding domain, RBD 89 177 IPR035979 GO:0003676
Mupr93g00001 753 PIRSF Transl_init_eIF3b 41 748 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr93g00001 753 Hamap Eukaryotic translation initiation factor 3 subunit B [EIF3B]. 82 747 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr93g00001 753 FunFam Eukaryotic translation initiation factor 3 subunit B 89 188 - -
Mupr93g00001 753 SUPERFAMILY DPP6 N-terminal domain-like 252 635 - -
Mupr93g00001 753 Gene3D - 217 416 IPR015943 GO:0005515
Mupr93g00001 753 FunFam Eukaryotic translation initiation factor 3 subunit B 215 416 - -
Mupr93g00001 753 CDD RRM_eIF3B 93 177 IPR034363 -
Mupr93g00001 753 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 116 170 IPR000504 GO:0003723
Mupr93g00001 753 FunFam Eukaryotic translation initiation factor 3 subunit B 445 660 - -
Mupr93g00001 753 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 69 745 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr93g00001 Mupr-Chr93 2858 6945 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr93g00001 39 747 Eukaryotic Initiation Factors Gene Family AT5G27640 76.620 0.0 1182