Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9393g00001 ATCTCCTTCATTCAATGTCCAGAAAAAGTCACATTACACACCCCACTAAGCCTAGATCTTCTTGTTCATGGCATTGAGCCACGAGTCCCTCTAAAAATCCTATTCTGTTTCCACCCTTTTGCTCTCCTCACTTCAAAACCTGTGTTTCATAGTTGGGGTCTCATGGCTGAAGCTGCTGAGCCTAAAGCATTGCCTGAGGCAGAGAAGAAGAAGGAGCAAAGTTTACCCTTTTACAAACTCTTCTCATTTGCAGACAAGTGTGATTGGATGCTCATGATCTCTGGCAGCATAGGAGCCATTGTTCACGGCTCATCCATGCCAGTTTTCTTCCTCCTCTTTGGTGAAATGGTTAATGGCTTTGGCAAAAACCAAATGGACTTGAAGAAAATGACACAAGAAGTATCAAAGTATGCTCTCTATTTCGTGTACCTTGGCCTTGTCGTTTGCATATCATCCTATGCAGAAATTGCATGCTGGATGTACACTGGGGAGAGGCAAGTGAGCACACTTAGAAAGAAGTACTTGGAGGCAGTGCTTAAACAAGACGTTGGTTTCTTTGACACGGATGCTAGAACAGGAGATATTGTTTTCAGTGTCTCCACGGATACACTACTAGTCCAAGATGCTATAAGCGAGAAGGTGGGGAACTTCATACACTATCTATCAACGTTTCTGGCGGGTCTAGTGGTTGGTTTTGTGTCAGCATGGAGGCTAGCACTTTTGAGTGTCGCAGTGATTCCTGGGATTGCATTTGCTGGTGGCTTGTATGCTTACACACTCACTGGCCTTACATCAAAGAGTCGTGAATCTTATGCAAATGCTGGCATCATAGCAGAGCAGGCCATTGCTCAAGTTAGAACTGTTTACTCTTATGTTGGTGAGAGCAAAGCACTGAATTCTTATTCTGATGCAATACAAAACACACTGAAGCTTGGATACAAGGCAGGTATGGCCAAAGGTTTAGGCCTAGGATGCACATATGGAATAGCTTGCATGTCTTGGGCACTAGTTTTCTGGTATGCTGGAGTTTTCATCAGGAATGGACAAACAGATGGTGGCAAGGCGTTCACGGCGATTTTCTCGGCCATTGTTGGTGGCATGAGTTTGGGACAGTCGTTTTCAAATTTAGGTGCTTTCAGCAAAGGCAAAGCAGCTGGATACAAATTGATGGAGATCATCAAACAGAAGCCAACAATAGTGGAAGATCCATCAGAAGGAAAGTGCTTGGCTGAGGTTAATGGTAACATTGAGTTTAAGGATGTTACTTTCAGCTACCCTTCGAGGCCGGATGTGTTTATCTTTCGCAGTTTCTCAATCTTTTTCCCTGCTGGAAAAACTGTCGCGGTTGTTGGTGGTAGTGGATCTGGAAAGAGCACAGTTGTTTCCTTGATAGAAAGGTTCTATGATCCAAATGAAGGTCAGGTTCTGCTGGATAATGTGGACATTAAGACACTACAACTAAAATGGTTGCGCGATCAAATTGGTTTGGTGAATCAAGAACCTGCACTCTTTGCAACTACCATTCTTGAGAATATACTCTATGGAAAATCTGATGCAACAATGGCTGAAGTGGAAGCTGCTACTTCTGCTGCAAATGCTCATAGCTTTATCACATTGCTTCCTAATGGCTATAACACTCAGGTAGGAGAGCGAGGAGTTCAATTATCTGGGGGCCAAAAGCAAAGAATTGCAATTGCCAGAGCTATGTTGAAGAATCCAAAGATTCTTCTATTAGATGAAGCAACTAGTGCTCTTGATGCAGGGTCTGAAAGCATTGTTCAAGAGGCACTAGACAGGCTCATGGTTGGAAGAACAACCGTGGTTGTTGCGCATCGTCTATCAACCATAAGGAATGTTGATACCATTGCAGTTATACAACAAGGACAAGTTGTTGAGACAGGCACACATGAAGAGCTCATTGCCAAGGCAGGCACCTATGCTTCACTCATCCGGTTCCAAGAAATGGTTGGAAATAGAGACTTCTCCAACCCATCAACTCGCCGAACACGGTCATCACGCTTGAGCCATTCATTGTCAACAAAGTCTTTGAGCCTCCGATCTGGAAGCTTGAGGAACTTGAGCTACCAGTACAGCACTGGTGCCGATGGCCGCATTGAGATGATATCAAATGCTGAAACAGATAAGAAAAATCCTGCCCCGGATGGATATTTCTTCAGGTTGCTCAAGTTGAATGCTCCTGAGTGGCCTTACTCAATCATGGGAGCTGTTGGTTCTGTTCTTTCTGGATTCATTGGCCCAACTTTTGCCATTGTTATGAGCAACATGATTGAGGTCTTTTACTTCAGAAATTATGCATCCATGGAGAGGAAGACTAAGGAGTATGTCTTCATTTACATTGGTGCTGGTCTTTATGCAGTTGGTGCATACTTGATACAACATTACTTTTTTAGTATCATGGGAGAAAACCTCACCACAAGGGTCAGAAGAATGATGCTTGCCGCTATTTTGAGGAATGAAGTTGGATGGTTCGATGAGGAGGAGCACAACTCAAGCCTTGTTGCAGCTCGCCTTGCCACTGATGCAGCTGATGTCAAGTCTGCTATTGCTGAGAGGATATCAGTTATACTGCAAAACATGACATCTCTCCTTACTTCTTTTATAGTTGCTTTCATTGTGGAATGGAGGGTTTCCTTACTCATCTTGGCAACCTTCCCTCTCCTTGTTCTAGCCAATTTCGCTCAGCAACTATCTCTGAAAGGGTTTGCTGGAGACACAGCCAAGGCTCATGCAAAGACAAGCATGATAGCAGGAGAGGGAGTGAGCAACATCAGAACAGTTGCAGCATTCAATGCCCAAAACAAGATGCTATCTGTGTTCTGCCATGAGCTCCGCCTGCCGCAGCGCCAGAGCCTGCGCCGGAGCCAAACATCTGGCCTCTTGTTCGGCCTCTCTCAGCTAGCCCTCTATGCCTCCGAGGCTCTCATTCTATGGTATGGTGCACATTTGGTGAGCAAAGGCGCTTCAACCTTCTCAAAAGTGATCAAGGTGTTTGTGGTCCTAGTGATCACGGCAAATTCAGTGGCCGAGACGGTGAGCCTGGCGCCGGAGATAATCCGTGGCGGCGAAGCAGTTGGCTCGGTGTTCTCAATCCTTGATCGCTCGACAAGGATTGATCCTGATGATCCTGATGCTGAGTTGGTTGAATCGCTTCGCGGGGAGATTGAGCTGAGACATGTTGATTTTGCATACCCTTCTAGGCCGGATGTGATGGTGTTTAAGGATTTGAACCTTAGGATTCGTGCAGGTCAGAGCCAGGCTCTTGTGGGGGCAAGTGGTTCAGGGAAGAGTTCTGTGATTGCATTGATTGAGAGATTCTATGACCCTATTGCTGGGAAAGTAATGGTGGATGGAAAGGACATTAGGAAGTTGAACTTGAAGTCTTTGAGGCTCAAGATTGGGTTGGTGCAGCAAGAGCCAGCACTTTTTGCTGCAAGCATTTTTGAGAACATTGCATATGGGAAGGAGGGTGCAACTGAGGCTGAGGTGATAGAGGCGGCACGAGCCGCCAATGTGCATGCATTTGTGAGCAGTTTGCCTGAGGGTTACAAGACACCTGTTGGTGAGAGAGGTGTGCAACTCTCTGGAGGGCAAAAGCAAAGGATTGCTATTGCAAGGGCTGTGCTTAAGGACCCCACAATTCTTCTACTAGATGAGGCTACAAGTGCACTAGATGCTGAGTCTGAGTGTGTGCTACAAGAGGCCTTGGAGAGGCTAATGAGGGGTCGCACCACAGTGCTTGTGGCTCATCGTTTGTCAACCATTAGAGGGGTTGACTGCATTGGAGTGGTTCAAGATGGCCGCATTGTGGAGCAAGGTAGCCATGCTGAGCTTTTCAGCAGGCCTGAGGGGGCATATTCTAGACTCTTGCAGCTACAACATCATCACATATGA 3912 0.4601 ISFIQCPEKVTLHTPLSLDLLVHGIEPRVPLKILFCFHPFALLTSKPVFHSWGLMAEAAEPKALPEAEKKKEQSLPFYKLFSFADKCDWMLMISGSIGAIVHGSSMPVFFLLFGEMVNGFGKNQMDLKKMTQEVSKYALYFVYLGLVVCISSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDPSEGKCLAEVNGNIEFKDVTFSYPSRPDVFIFRSFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGKSDATMAEVEAATSAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTIAVIQQGQVVETGTHEELIAKAGTYASLIRFQEMVGNRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPDGYFFRLLKLNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYFRNYASMERKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKMLSVFCHELRLPQRQSLRRSQTSGLLFGLSQLALYASEALILWYGAHLVSKGASTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRSTRIDPDDPDAELVESLRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPIAGKVMVDGKDIRKLNLKSLRLKIGLVQQEPALFAASIFENIAYGKEGATEAEVIEAARAANVHAFVSSLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHAELFSRPEGAYSRLLQLQHHHI 1303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9393g00001 1303 CDD ABC_MTABC3_MDL1_MDL2 1061 1299 - -
Mupr9393g00001 1303 FunFam ABC transporter B family member 19 1051 1300 - -
Mupr9393g00001 1303 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 95 381 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr9393g00001 1303 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 739 1026 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr9393g00001 1303 SUPERFAMILY ABC transporter transmembrane region 720 1040 IPR036640 GO:0005524|GO:0016020
Mupr9393g00001 1303 FunFam ABC transporter B family member 1 718 1027 - -
Mupr9393g00001 1303 FunFam ABC transporter B family member 1 79 415 - -
Mupr9393g00001 1303 CDD ABC_6TM_Pgp_ABCB1_D2_like 728 1044 - -
Mupr9393g00001 1303 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1063 1297 IPR003439 GO:0005524
Mupr9393g00001 1303 CDD ABC_MTABC3_MDL1_MDL2 416 653 - -
Mupr9393g00001 1303 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 416 652 IPR003439 GO:0005524
Mupr9393g00001 1303 SUPERFAMILY ABC transporter transmembrane region 79 401 IPR036640 GO:0005524|GO:0016020
Mupr9393g00001 1303 Gene3D ABC transporter type 1, transmembrane domain 139 1035 IPR036640 GO:0005524|GO:0016020
Mupr9393g00001 1303 FunFam ABC transporter B family member 19 406 654 - -
Mupr9393g00001 1303 FunFam ABC transporter B family member 19 1028 1050 - -
Mupr9393g00001 1303 Pfam ABC transporter 1080 1228 IPR003439 GO:0005524
Mupr9393g00001 1303 CDD ABC_6TM_Pgp_ABCB1_D1_like 92 389 - -
Mupr9393g00001 1303 Gene3D - 414 677 IPR027417 -
Mupr9393g00001 1303 Gene3D - 1051 1302 IPR027417 -
Mupr9393g00001 1303 SMART AAA_5 1088 1274 IPR003593 GO:0016887
Mupr9393g00001 1303 SMART AAA_5 443 629 IPR003593 GO:0016887
Mupr9393g00001 1303 ProSitePatterns ABC transporters family signature. 1200 1214 IPR017871 GO:0005524|GO:0016887
Mupr9393g00001 1303 PANTHER ABC TRANSPORTER B FAMILY 58 751 IPR039421 -
Mupr9393g00001 1303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1050 1299 IPR027417 -
Mupr9393g00001 1303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 653 IPR027417 -
Mupr9393g00001 1303 Pfam ABC transporter 438 583 IPR003439 GO:0005524
Mupr9393g00001 1303 ProSitePatterns ABC transporters family signature. 555 569 IPR017871 GO:0005524|GO:0016887
Mupr9393g00001 1303 Pfam ABC transporter transmembrane region 97 366 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr9393g00001 1303 Pfam ABC transporter transmembrane region 739 1010 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9393g00001 Mupr-Chr9393 9540 19198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9393g00001 61 1299 Calmodulin-binding Proteins AT2G36910 53.693 0.0 1346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9393g00001 K05658 - gmx:100797124 2284.99