Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr9378g00002 | ATGAATAATTTCTCAAAACTCAACGACTCGCCCATGTTCCGGCAACAGCTCCAATGCATGGAAGAGAGTTCAGAATCGTTACGCGCGAGATGTTGTAAGTTCTACAAAGGATGTCGAAAGTACACGGAAGGACTTGGAGAAGCATATGATGGAGACATTGCATTTGCAACTGCCCTTGAAAGTTTTGGAGGAGGACATAGTGATCCTCTATTTGTAACTTTGGGAGGACCTGTTATAACCAAATTTGCTATTGCTACGAGAGAAATCGGTACATACAAGGAACTTCTTAGGTCGCAGGTGGAACACATGCTGAATGACCGGGTACTAAACATGCTAAACGTCGATATACTTGATGTCAAGGAAGCTCGAAGGCGTTTTGATAAAGCTTCCCTTGTACATGATCAGGCACGTGAGAAGTTTATGTCATTGAGAAAAAGCACTAGGGTGGATATTGCCGCTGTGGTAGAAGAGGAATTGCACAATTCAAGAAACTCGTTTGAGGAAGCTCGTTTCAATCTGGTTAGTGCTCTTCATAGTGTTGAGGCCAAGAAGAGATTTGAGTTTTTGGAGGCAGTCACTGGAGTCATGGATGCTCATCTTCGGTATTATCGACAGAGTTATCAGCTATTACATGAGCTAGAGCCTTTCATTATCGAGGTTTTGGCTTATACACAAAAAGCAAGAGAAAGTTACAATGAAGAGCAGATTAGTCTTTGTGAAAGAATGCTGGAGTACAAAAAACACATTCATCAAGAAAGTATGTTGTCCTTGAATGGCCCTTATAGTTCTCCCAGTAGAGATGGGGTTCAAGGACAGCCTTTTTCTAGGATATCAAATAAAGTGGTAGATGCTGTAACAGAATCTGCTGAAAATGGAAAGGTTCAAATCCTTCGGCAAGGATATCTCTCTAAACGATCCTCAAATTTGAGGGGTGACTGGAAGAGAAGGTATTTTGTTCTTGATAGTCGCGGAATGCTTTACTACTTTCGTAAACCATTACATGTTGGCAATCAATCATCTTTACACAGAAATTGTGCCACTGATAATAGTGCTGGAATTTTGAGTCGCCTGCTTTCTTCACATAACCATGGAATTCTCCCTGATGAGAAATCTGTGGCACGTCATACAGTGAACCTGCTCACATCAACAATCAAGATTGATGCTGAACAGTCAGATTTAAGGTTCTGCTTCAGGATTATTTCACCATCAAAGAGTTATACATTGCAGGCCAAAAAAATGCAGGCAGAAAATGCCCTGGACCAGATGGATTGGATGGAAAAGATAACTGGCGTAATTGCCTCCTTATTGAGTGCACAGACACTGACAGATGACTCAGAAAGCCGTGACTGTTACTCTGCCAGCAAGATTTATTTGTTAGGTTCTCCATGTGATGATCATGCACTGAGTGGGGATCCTATATCATCTGAGGACTCGCAGAAGAATAAGCACTGTATAAAAAATGAAAAGCCACTCGATGTTCTTAGAAAGGTCAGCGGGAATGACAAATGTGCTGATTGTGGTAAACCTGATCCAGACTGGGCATCGTTAAACCTTGGCATCCTTGTATGCATTGAATGTTCCGGTGTTCACCGTAATCTTGGTGTGCATATATCAAAAGTAAGATCACTGACACTTGATGTAAAAGTATGGGATTCCGCTGTCTTAACCATGTTTCAGTCACTAGGGAATCTCTTTGCAAACTCAGTTTGGGAGGAACTGTTGAATGCATGTACTTCACAAGCTGAGGACAATGCTGATGGTTCATCCAAGACACCGAAAAAGTTATTTCATGCAAGAAAGCCATCATATGATGATCCTATTTCACTAAAGGAGAGGTTCATTCATGCAAAGTATGCTGCGAAAATCTTTGTTCGCCGGACAACAAATGACAACAGTCTCCTTTCAGTGGCACAACAGATGGCAGAAAGCATCAGTGGCAATGACAAGAAAGCAGTGTACAGGCACATTGTGAAGTCAGATGTGAATGTCAATGCTATTAGTGGGGAAGCATTACGTGGCTTTTCTTCCAACACGCCTTCTCCAATTGGTCCAAACATATCACCTGAAATTAAAACTCAAGTAATGGAGGGCATAAAAGATGGTTCTAGTGCGCTTCACCTGGCATGCCTAACTGGTGATGCTGCAATGGTGGAGCTGCTCCTACAGTATGGGGCAGATGTAAATGCTATTGATTCCAGAGGGAGGACACCACTACATTATTGCATTATGAAAGGGAAGAATGCAGCTGCAAAAGTACTTATTTCAAGGGGGGCCAATCAACATGCCTTAGACAAAGAAGGCAACACTCCTTTTAAGCTTGCACGAGAACCTGACACTGTTGGCAAAGATATTCTTGCTATTAACAAGCAAATGGCATACCCTCAAAACTTAATGGAAAAATAA | 2403 | 0.4186 | MNNFSKLNDSPMFRQQLQCMEESSESLRARCCKFYKGCRKYTEGLGEAYDGDIAFATALESFGGGHSDPLFVTLGGPVITKFAIATREIGTYKELLRSQVEHMLNDRVLNMLNVDILDVKEARRRFDKASLVHDQAREKFMSLRKSTRVDIAAVVEEELHNSRNSFEEARFNLVSALHSVEAKKRFEFLEAVTGVMDAHLRYYRQSYQLLHELEPFIIEVLAYTQKARESYNEEQISLCERMLEYKKHIHQESMLSLNGPYSSPSRDGVQGQPFSRISNKVVDAVTESAENGKVQILRQGYLSKRSSNLRGDWKRRYFVLDSRGMLYYFRKPLHVGNQSSLHRNCATDNSAGILSRLLSSHNHGILPDEKSVARHTVNLLTSTIKIDAEQSDLRFCFRIISPSKSYTLQAKKMQAENALDQMDWMEKITGVIASLLSAQTLTDDSESRDCYSASKIYLLGSPCDDHALSGDPISSEDSQKNKHCIKNEKPLDVLRKVSGNDKCADCGKPDPDWASLNLGILVCIECSGVHRNLGVHISKVRSLTLDVKVWDSAVLTMFQSLGNLFANSVWEELLNACTSQAEDNADGSSKTPKKLFHARKPSYDDPISLKERFIHAKYAAKIFVRRTTNDNSLLSVAQQMAESISGNDKKAVYRHIVKSDVNVNAISGEALRGFSSNTPSPIGPNISPEIKTQVMEGIKDGSSALHLACLTGDAAMVELLLQYGADVNAIDSRGRTPLHYCIMKGKNAAAKVLISRGANQHALDKEGNTPFKLAREPDTVGKDILAINKQMAYPQNLMEK | 800 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr9378g00002 | 800 | SMART | arf_gap_3 | 488 | 631 | IPR001164 | GO:0005096 | |
Mupr9378g00002 | 800 | Pfam | PH domain | 297 | 432 | IPR001849 | - | |
Mupr9378g00002 | 800 | Gene3D | Arf GTPase activating protein | 471 | 632 | IPR038508 | - | |
Mupr9378g00002 | 800 | Gene3D | Arfaptin homology (AH) domain/BAR domain | 5 | 251 | IPR027267 | - | |
Mupr9378g00002 | 800 | ProSiteProfiles | Ankyrin repeat profile. | 700 | 732 | IPR002110 | GO:0005515 | |
Mupr9378g00002 | 800 | Pfam | BAR domain of APPL family | 7 | 234 | IPR004148 | GO:0005515|GO:0005737 | |
Mupr9378g00002 | 800 | FunFam | ADP-ribosylation factor GTPase-activating protein AGD1 | 472 | 632 | - | - | |
Mupr9378g00002 | 800 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 488 | 631 | IPR001164 | GO:0005096 | |
Mupr9378g00002 | 800 | Coils | Coil | 119 | 139 | - | - | |
Mupr9378g00002 | 800 | SUPERFAMILY | BAR/IMD domain-like | 7 | 318 | IPR027267 | - | |
Mupr9378g00002 | 800 | SMART | ANK_2a | 733 | 762 | IPR002110 | GO:0005515 | |
Mupr9378g00002 | 800 | SMART | ANK_2a | 700 | 729 | IPR002110 | GO:0005515 | |
Mupr9378g00002 | 800 | Pfam | Putative GTPase activating protein for Arf | 491 | 625 | IPR001164 | GO:0005096 | |
Mupr9378g00002 | 800 | CDD | BAR_SFC_plant | 16 | 216 | IPR035670 | - | |
Mupr9378g00002 | 800 | Gene3D | - | 689 | 792 | IPR036770 | - | |
Mupr9378g00002 | 800 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 487 | 626 | IPR037278 | - | |
Mupr9378g00002 | 800 | CDD | PH_ACAP | 298 | 437 | - | - | |
Mupr9378g00002 | 800 | PANTHER | CENTAURIN/ARF | 4 | 791 | IPR045258 | GO:0005096 | |
Mupr9378g00002 | 800 | Pfam | Ankyrin repeats (3 copies) | 700 | 761 | IPR002110 | GO:0005515 | |
Mupr9378g00002 | 800 | ProSiteProfiles | Ankyrin repeat region circular profile. | 733 | 765 | - | - | |
Mupr9378g00002 | 800 | SMART | 5bar | 3 | 219 | IPR004148 | GO:0005515|GO:0005737 | |
Mupr9378g00002 | 800 | ProSiteProfiles | Ankyrin repeat profile. | 733 | 765 | IPR002110 | GO:0005515 | |
Mupr9378g00002 | 800 | CDD | ArfGap | 491 | 618 | - | - | |
Mupr9378g00002 | 800 | PRINTS | HIV Rev interacting protein signature | 542 | 563 | IPR001164 | GO:0005096 | |
Mupr9378g00002 | 800 | PRINTS | HIV Rev interacting protein signature | 500 | 519 | IPR001164 | GO:0005096 | |
Mupr9378g00002 | 800 | PRINTS | HIV Rev interacting protein signature | 519 | 536 | IPR001164 | GO:0005096 | |
Mupr9378g00002 | 800 | SUPERFAMILY | PH domain-like | 296 | 446 | - | - | |
Mupr9378g00002 | 800 | Gene3D | - | 287 | 449 | IPR011993 | - | |
Mupr9378g00002 | 800 | ProSiteProfiles | Ankyrin repeat region circular profile. | 700 | 731 | - | - | |
Mupr9378g00002 | 800 | SUPERFAMILY | Ankyrin repeat | 701 | 776 | IPR036770 | - | |
Mupr9378g00002 | 800 | SMART | PH_update | 296 | 435 | IPR001849 | - | |
Mupr9378g00002 | 800 | ProSiteProfiles | PH domain profile. | 295 | 433 | IPR001849 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr9378g00002 | Mupr-Chr9378 | 3854 | 12073 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr9378g00002 | 498 | 625 | C2H2 Transcription Factor Family | AT4G21160 | 41.860 | 2.22e-21 | 94.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr9378g00002 | K12489 | - | gmx:100797073 | 1296.95 |