Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9360g00001 ATGATTGAGGTAAGCATAACAATTAATGATGTAGGTGGAGAAAGTGAAATGAATTCACTAATTCCACATGCAATGCCTCGATGCCTTGTCTTGATAAGGAGGCACATACATAAGATGACCGCAGGAAGCAACACAGCAGTTAATTCCCCTGGATTCCTAGAGTCGAGCAACATCAGTGGCTATAGTTATGGCATAGGAATTTCCATTGGGATTCTCTTGCTCATTGTAACCATCACTCTAACTTCATACTTCTGCACCAGAACACGTGTGTCGATTGCTCCACATTCTAGGAATAGGAGAAACTCACGCAATGTCCTTGAAACGCAGCACTCTGTTGTGGATGTAAGTCTTGATGAAGCCACGATTCTGAGTTATCCAACTCTGCTCTACTCTCAAGCCAAACTGAAGAAATCTGATTCCACAGCAACATGTTGCTCCATATGTCTTGCAGATTACAAGGGTACTGATGTGCTTCGGGTGCTACCTGATTGTGGTCACCAATTCCACCTCAAGTGCATAGATCCCTGGTTGAGGTTGCATCCCACTTGTCCAGTTTGCAGAACATCTCCAATCCCAACGCCACTCTCAACTCCTCTCGCTCAAGTCGTTCCCTTAGCAACCACACACCATTCCTAG 636 0.4497 MIEVSITINDVGGESEMNSLIPHAMPRCLVLIRRHIHKMTAGSNTAVNSPGFLESSNISGYSYGIGISIGILLLIVTITLTSYFCTRTRVSIAPHSRNRRNSRNVLETQHSVVDVSLDEATILSYPTLLYSQAKLKKSDSTATCCSICLADYKGTDVLRVLPDCGHQFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAQVVPLATTHHS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9360g00001 211 CDD RING-H2_PA-TM-RING 144 187 - -
Mupr9360g00001 211 SMART ring_2 145 186 IPR001841 -
Mupr9360g00001 211 ProSiteProfiles Zinc finger RING-type profile. 145 187 IPR001841 -
Mupr9360g00001 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 191 IPR013083 -
Mupr9360g00001 211 Pfam Ring finger domain 145 187 IPR001841 -
Mupr9360g00001 211 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 52 201 IPR045899 -
Mupr9360g00001 211 SUPERFAMILY RING/U-box 126 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9360g00001 Mupr-Chr9360 4608 5400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9360g00001 51 208 C3H Transcription Factor Family AT2G35910 61.250 1.34e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9360g00001 - - gmx:100811799 266.544